Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YBX1P67809 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.12■□□□□ 0.49
YBX1P67809 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.12■□□□□ 0.49
YBX1P67809 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
YBX1P67809 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.12■□□□□ 0.49
YBX1P67809 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YBX1P67809 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.12■□□□□ 0.49
YBX1P67809 KRT18P22-201ENST00000402024 1347 ntBASIC18.12■□□□□ 0.49
YBX1P67809 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YBX1P67809 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.12■□□□□ 0.49
YBX1P67809 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YBX1P67809 KRT8P45-201ENST00000414328 1447 ntBASIC18.12■□□□□ 0.49
YBX1P67809 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
YBX1P67809 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.12■□□□□ 0.49
YBX1P67809 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
YBX1P67809 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.12■□□□□ 0.49
YBX1P67809 LTB4R2-202ENST00000528054 3092 ntBASIC18.12■□□□□ 0.49
YBX1P67809 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YBX1P67809 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YBX1P67809 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
YBX1P67809 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
YBX1P67809 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
YBX1P67809 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.11■□□□□ 0.49
YBX1P67809 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
YBX1P67809 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 LINC01023-201ENST00000606054 436 ntBASIC18.11■□□□□ 0.49
YBX1P67809 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
YBX1P67809 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.11■□□□□ 0.49
YBX1P67809 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.11■□□□□ 0.49
YBX1P67809 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
YBX1P67809 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.11■□□□□ 0.49
YBX1P67809 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.11■□□□□ 0.49
YBX1P67809 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.11■□□□□ 0.49
YBX1P67809 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YBX1P67809 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
YBX1P67809 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
YBX1P67809 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
YBX1P67809 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.1■□□□□ 0.49
YBX1P67809 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
YBX1P67809 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 MTMR9LP-203ENST00000426597 1545 ntBASIC18.1■□□□□ 0.49
YBX1P67809 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.1■□□□□ 0.49
YBX1P67809 SLC25A3P1-201ENST00000443844 931 ntBASIC18.1■□□□□ 0.49
YBX1P67809 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.1■□□□□ 0.49
YBX1P67809 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 AC068587.9-201ENST00000641814 219 ntBASIC18.1■□□□□ 0.49
YBX1P67809 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.1■□□□□ 0.49
YBX1P67809 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.1■□□□□ 0.49
YBX1P67809 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.1■□□□□ 0.49
YBX1P67809 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YBX1P67809 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.09■□□□□ 0.49
YBX1P67809 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.09■□□□□ 0.49
YBX1P67809 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
YBX1P67809 HEIH-201ENST00000623091 1652 ntBASIC18.09■□□□□ 0.49
YBX1P67809 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
YBX1P67809 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
YBX1P67809 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.09■□□□□ 0.49
YBX1P67809 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 FZD10-202ENST00000539839 3282 ntBASIC18.09■□□□□ 0.49
YBX1P67809 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
YBX1P67809 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.09■□□□□ 0.49
YBX1P67809 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.09■□□□□ 0.49
YBX1P67809 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.09■□□□□ 0.49
YBX1P67809 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YBX1P67809 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.09■□□□□ 0.49
YBX1P67809 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.09■□□□□ 0.49
YBX1P67809 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms