Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
AP1S1P61966 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S1P61966 AL499627.1-201ENST00000569373 2188 ntBASIC18.69■□□□□ 0.58
AP1S1P61966 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 AC087289.5-201ENST00000586076 3175 ntBASIC18.69■□□□□ 0.58
AP1S1P61966 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
AP1S1P61966 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
AP1S1P61966 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
AP1S1P61966 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.69■□□□□ 0.58
AP1S1P61966 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.69■□□□□ 0.58
AP1S1P61966 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.69■□□□□ 0.58
AP1S1P61966 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.69■□□□□ 0.58
AP1S1P61966 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
AP1S1P61966 AC093503.3-201ENST00000624917 2352 ntBASIC18.69■□□□□ 0.58
AP1S1P61966 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.69■□□□□ 0.58
AP1S1P61966 AL163051.1-201ENST00000569214 1512 ntBASIC18.69■□□□□ 0.58
AP1S1P61966 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S1P61966 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
AP1S1P61966 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
AP1S1P61966 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.68■□□□□ 0.58
AP1S1P61966 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.68■□□□□ 0.58
AP1S1P61966 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
AP1S1P61966 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
AP1S1P61966 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.68■□□□□ 0.58
AP1S1P61966 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.68■□□□□ 0.58
AP1S1P61966 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 AL359075.1-203ENST00000462729 1002 ntBASIC18.68■□□□□ 0.58
AP1S1P61966 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.68■□□□□ 0.58
AP1S1P61966 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.68■□□□□ 0.58
AP1S1P61966 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
AP1S1P61966 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S1P61966 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.67■□□□□ 0.58
AP1S1P61966 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
AP1S1P61966 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
AP1S1P61966 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.67■□□□□ 0.58
AP1S1P61966 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.67■□□□□ 0.58
AP1S1P61966 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 SPDYE15P-201ENST00000424157 909 ntBASIC18.67■□□□□ 0.58
AP1S1P61966 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
AP1S1P61966 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.67■□□□□ 0.58
AP1S1P61966 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.67■□□□□ 0.58
AP1S1P61966 AL157888.1-201ENST00000631930 593 ntBASIC18.67■□□□□ 0.58
AP1S1P61966 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.67■□□□□ 0.58
AP1S1P61966 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.67■□□□□ 0.58
AP1S1P61966 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S1P61966 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.67■□□□□ 0.58
AP1S1P61966 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
AP1S1P61966 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
AP1S1P61966 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP1S1P61966 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 MIR149-201ENST00000384879 89 ntBASIC18.66■□□□□ 0.58
AP1S1P61966 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.66■□□□□ 0.58
AP1S1P61966 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.66■□□□□ 0.58
AP1S1P61966 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
AP1S1P61966 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.66■□□□□ 0.58
AP1S1P61966 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms