Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.98■■□□□ 1.11
PPP4CP60510 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP4CP60510 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP4CP60510 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP4CP60510 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.97■■□□□ 1.11
PPP4CP60510 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.97■■□□□ 1.11
PPP4CP60510 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.97■■□□□ 1.11
PPP4CP60510 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PPP4CP60510 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.97■■□□□ 1.11
PPP4CP60510 NUS1P1-201ENST00000446295 882 ntBASIC21.97■■□□□ 1.11
PPP4CP60510 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.97■■□□□ 1.11
PPP4CP60510 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.97■■□□□ 1.11
PPP4CP60510 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.97■■□□□ 1.11
PPP4CP60510 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.97■■□□□ 1.11
PPP4CP60510 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PPP4CP60510 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPP4CP60510 AC009102.3-201ENST00000623118 1491 ntBASIC21.96■■□□□ 1.11
PPP4CP60510 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 SDHAP2-201ENST00000455183 2001 ntBASIC21.96■■□□□ 1.11
PPP4CP60510 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.96■■□□□ 1.11
PPP4CP60510 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.96■■□□□ 1.11
PPP4CP60510 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PPP4CP60510 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.96■■□□□ 1.11
PPP4CP60510 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.96■■□□□ 1.11
PPP4CP60510 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.96■■□□□ 1.11
PPP4CP60510 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.96■■□□□ 1.11
PPP4CP60510 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.96■■□□□ 1.11
PPP4CP60510 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPP4CP60510 AL353692.3-201ENST00000407031 1396 ntBASIC21.96■■□□□ 1.11
PPP4CP60510 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PPP4CP60510 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.95■■□□□ 1.1
PPP4CP60510 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.95■■□□□ 1.1
PPP4CP60510 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PPP4CP60510 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
PPP4CP60510 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.95■■□□□ 1.1
PPP4CP60510 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.95■■□□□ 1.1
PPP4CP60510 IGHV3-41-201ENST00000613121 348 ntBASIC21.95■■□□□ 1.1
PPP4CP60510 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.95■■□□□ 1.1
PPP4CP60510 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PPP4CP60510 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PPP4CP60510 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPP4CP60510 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PPP4CP60510 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPP4CP60510 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PPP4CP60510 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPP4CP60510 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.94■■□□□ 1.1
PPP4CP60510 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PPP4CP60510 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.94■■□□□ 1.1
PPP4CP60510 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.94■■□□□ 1.1
PPP4CP60510 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
PPP4CP60510 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPP4CP60510 SLC25A24-204ENST00000569674 2357 ntBASIC21.94■■□□□ 1.1
PPP4CP60510 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PPP4CP60510 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PPP4CP60510 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PPP4CP60510 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
PPP4CP60510 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PPP4CP60510 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PPP4CP60510 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.93■■□□□ 1.1
PPP4CP60510 AC113404.2-201ENST00000507884 177 ntBASIC21.93■■□□□ 1.1
PPP4CP60510 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms