Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
AP3S2P59780 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
AP3S2P59780 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.97■□□□□ 0.15
AP3S2P59780 AD000864.1-201ENST00000624076 2295 ntBASIC15.97■□□□□ 0.15
AP3S2P59780 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
AP3S2P59780 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP3S2P59780 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S2P59780 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S2P59780 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
AP3S2P59780 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S2P59780 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3S2P59780 AC112777.1-201ENST00000540175 1423 ntBASIC15.96■□□□□ 0.15
AP3S2P59780 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S2P59780 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S2P59780 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
AP3S2P59780 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP3S2P59780 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
AP3S2P59780 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
AP3S2P59780 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.96■□□□□ 0.15
AP3S2P59780 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.96■□□□□ 0.15
AP3S2P59780 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.96■□□□□ 0.15
AP3S2P59780 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.96■□□□□ 0.15
AP3S2P59780 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
AP3S2P59780 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
AP3S2P59780 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S2P59780 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.96■□□□□ 0.14
AP3S2P59780 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S2P59780 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.96■□□□□ 0.14
AP3S2P59780 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S2P59780 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S2P59780 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S2P59780 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP3S2P59780 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.95■□□□□ 0.14
AP3S2P59780 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.95■□□□□ 0.14
AP3S2P59780 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.95■□□□□ 0.14
AP3S2P59780 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
AP3S2P59780 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
AP3S2P59780 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP3S2P59780 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP3S2P59780 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.94■□□□□ 0.14
AP3S2P59780 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 AP006587.1-201ENST00000534129 1502 ntBASIC15.94■□□□□ 0.14
AP3S2P59780 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
AP3S2P59780 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
AP3S2P59780 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.94■□□□□ 0.14
AP3S2P59780 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
AP3S2P59780 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP3S2P59780 AL390719.1-204ENST00000412397 1219 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms