Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.2■□□□□ 0.98
CHMP4BP1P59074 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 AC007613.1-201ENST00000572811 2597 ntBASIC21.19■□□□□ 0.98
CHMP4BP1P59074 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 TSPY23P-201ENST00000440136 739 ntBASIC21.19■□□□□ 0.98
CHMP4BP1P59074 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 KRT126P-201ENST00000549467 1181 ntBASIC21.19■□□□□ 0.98
CHMP4BP1P59074 ZNF444P1-201ENST00000559497 298 ntBASIC21.19■□□□□ 0.98
CHMP4BP1P59074 AC069148.1-201ENST00000608741 768 ntBASIC21.19■□□□□ 0.98
CHMP4BP1P59074 CR769767.2-201ENST00000622735 460 ntBASIC21.19■□□□□ 0.98
CHMP4BP1P59074 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.19■□□□□ 0.98
CHMP4BP1P59074 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 SPDYE15P-201ENST00000424157 909 ntBASIC21.18■□□□□ 0.98
CHMP4BP1P59074 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 AC083849.1-201ENST00000615227 514 ntBASIC21.18■□□□□ 0.98
CHMP4BP1P59074 AC116407.4-201ENST00000623319 1061 ntBASIC21.18■□□□□ 0.98
CHMP4BP1P59074 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP4BP1P59074 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms