Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 AC112497.1-201ENST00000624824 639 ntBASIC19.69■□□□□ 0.74
CACNA2D1P54289 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 AC083906.6-201ENST00000641366 219 ntBASIC19.69■□□□□ 0.74
CACNA2D1P54289 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA2D1P54289 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA2D1P54289 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA2D1P54289 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA2D1P54289 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA2D1P54289 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA2D1P54289 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA2D1P54289 KRT18P23-201ENST00000435622 1283 ntBASIC19.68■□□□□ 0.74
CACNA2D1P54289 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA2D1P54289 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA2D1P54289 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.68■□□□□ 0.74
CACNA2D1P54289 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA2D1P54289 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA2D1P54289 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.68■□□□□ 0.74
CACNA2D1P54289 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA2D1P54289 LINC01238-205ENST00000567549 1107 ntBASIC19.68■□□□□ 0.74
CACNA2D1P54289 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CACNA2D1P54289 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.68■□□□□ 0.74
CACNA2D1P54289 AC005082.1-201ENST00000413042 2259 ntBASIC19.68■□□□□ 0.74
CACNA2D1P54289 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA2D1P54289 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA2D1P54289 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 AC112907.2-201ENST00000448639 330 ntBASIC19.67■□□□□ 0.74
CACNA2D1P54289 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 AC083849.1-201ENST00000615227 514 ntBASIC19.67■□□□□ 0.74
CACNA2D1P54289 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 Z98044.1-201ENST00000632503 1764 ntBASIC19.67■□□□□ 0.74
CACNA2D1P54289 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.67■□□□□ 0.74
CACNA2D1P54289 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA2D1P54289 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.66■□□□□ 0.74
CACNA2D1P54289 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 NEFHP1-201ENST00000412845 2629 ntBASIC19.66■□□□□ 0.74
CACNA2D1P54289 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 AL671277.2-201ENST00000458060 996 ntBASIC19.66■□□□□ 0.74
CACNA2D1P54289 RASA4DP-201ENST00000460726 1199 ntBASIC19.66■□□□□ 0.74
CACNA2D1P54289 AC092597.1-201ENST00000487352 616 ntBASIC19.66■□□□□ 0.74
CACNA2D1P54289 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms