Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDKN1AP38936 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.84■□□□□ 0.13
CDKN1AP38936 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.84■□□□□ 0.13
CDKN1AP38936 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.84■□□□□ 0.13
CDKN1AP38936 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.84■□□□□ 0.13
CDKN1AP38936 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.84■□□□□ 0.13
CDKN1AP38936 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
CDKN1AP38936 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.84■□□□□ 0.13
CDKN1AP38936 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDKN1AP38936 HLA-F-220ENST00000434407 884 ntBASIC15.84■□□□□ 0.13
CDKN1AP38936 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 AP002383.4-201ENST00000442518 975 ntBASIC15.84■□□□□ 0.13
CDKN1AP38936 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.84■□□□□ 0.13
CDKN1AP38936 KRT8P26-201ENST00000534154 1276 ntBASIC15.84■□□□□ 0.13
CDKN1AP38936 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.84■□□□□ 0.13
CDKN1AP38936 MIR3180-1-201ENST00000580374 94 ntBASIC15.84■□□□□ 0.13
CDKN1AP38936 MIR3180-3-201ENST00000584616 94 ntBASIC15.84■□□□□ 0.13
CDKN1AP38936 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.84■□□□□ 0.13
CDKN1AP38936 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.84■□□□□ 0.13
CDKN1AP38936 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.84■□□□□ 0.13
CDKN1AP38936 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDKN1AP38936 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.84■□□□□ 0.13
CDKN1AP38936 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 AC125437.2-201ENST00000625180 2167 ntBASIC15.84■□□□□ 0.13
CDKN1AP38936 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 AC018445.3-201ENST00000624177 1945 ntBASIC15.84■□□□□ 0.13
CDKN1AP38936 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.84■□□□□ 0.13
CDKN1AP38936 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDKN1AP38936 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDKN1AP38936 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDKN1AP38936 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CDKN1AP38936 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDKN1AP38936 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDKN1AP38936 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDKN1AP38936 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDKN1AP38936 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CDKN1AP38936 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDKN1AP38936 AL109659.2-201ENST00000606809 1674 ntBASIC15.83■□□□□ 0.13
CDKN1AP38936 AC098818.2-201ENST00000564925 2320 ntBASIC15.83■□□□□ 0.12
CDKN1AP38936 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKN1AP38936 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CDKN1AP38936 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDKN1AP38936 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKN1AP38936 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKN1AP38936 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.83■□□□□ 0.12
CDKN1AP38936 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDKN1AP38936 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.83■□□□□ 0.12
CDKN1AP38936 TSPY22P-201ENST00000427496 604 ntBASIC15.83■□□□□ 0.12
CDKN1AP38936 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDKN1AP38936 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKN1AP38936 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDKN1AP38936 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.83■□□□□ 0.12
CDKN1AP38936 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CDKN1AP38936 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CDKN1AP38936 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.83■□□□□ 0.12
CDKN1AP38936 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.83■□□□□ 0.12
CDKN1AP38936 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKN1AP38936 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKN1AP38936 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CDKN1AP38936 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDKN1AP38936 KRT18P1-202ENST00000452408 1331 ntBASIC15.83■□□□□ 0.12
CDKN1AP38936 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.83■□□□□ 0.12
CDKN1AP38936 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDKN1AP38936 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CDKN1AP38936 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.83■□□□□ 0.12
CDKN1AP38936 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKN1AP38936 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.83■□□□□ 0.12
CDKN1AP38936 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.83■□□□□ 0.12
CDKN1AP38936 AC093525.10-201ENST00000625130 1569 ntBASIC15.83■□□□□ 0.12
CDKN1AP38936 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKN1AP38936 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKN1AP38936 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKN1AP38936 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKN1AP38936 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKN1AP38936 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKN1AP38936 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDKN1AP38936 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKN1AP38936 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKN1AP38936 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.82■□□□□ 0.12
CDKN1AP38936 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKN1AP38936 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.82■□□□□ 0.12
CDKN1AP38936 CHCHD2P8-201ENST00000429873 447 ntBASIC15.82■□□□□ 0.12
CDKN1AP38936 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKN1AP38936 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.82■□□□□ 0.12
CDKN1AP38936 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.82■□□□□ 0.12
CDKN1AP38936 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.82■□□□□ 0.12
CDKN1AP38936 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms