Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT4P19013 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT4P19013 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT4P19013 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT4P19013 PRKY-204ENST00000533551 1019 ntBASIC18.67■□□□□ 0.58
KRT4P19013 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT4P19013 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT4P19013 AL137784.2-201ENST00000607332 1000 ntBASIC18.67■□□□□ 0.58
KRT4P19013 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT4P19013 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT4P19013 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT4P19013 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT4P19013 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KRT4P19013 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KRT4P19013 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT4P19013 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT4P19013 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT4P19013 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT4P19013 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT4P19013 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT4P19013 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT4P19013 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KRT4P19013 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT4P19013 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT4P19013 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
KRT4P19013 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT4P19013 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT4P19013 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT4P19013 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT4P19013 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
KRT4P19013 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT4P19013 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT4P19013 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT4P19013 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT4P19013 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT4P19013 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT4P19013 KRT8P45-201ENST00000414328 1447 ntBASIC18.66■□□□□ 0.58
KRT4P19013 REXO1L9P-201ENST00000604264 2108 ntBASIC18.65■□□□□ 0.58
KRT4P19013 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KRT4P19013 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT4P19013 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT4P19013 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT4P19013 POU5F1P3-201ENST00000428824 1078 ntBASIC18.65■□□□□ 0.58
KRT4P19013 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
KRT4P19013 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT4P19013 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.65■□□□□ 0.58
KRT4P19013 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT4P19013 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT4P19013 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
KRT4P19013 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT4P19013 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT4P19013 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KRT4P19013 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT4P19013 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT4P19013 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT4P19013 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT4P19013 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
KRT4P19013 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT4P19013 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
KRT4P19013 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT4P19013 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRT4P19013 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.64■□□□□ 0.58
KRT4P19013 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT4P19013 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT4P19013 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT4P19013 SLC25A6P5-201ENST00000435663 894 ntBASIC18.64■□□□□ 0.57
KRT4P19013 NCF1B-203ENST00000435988 1254 ntBASIC18.64■□□□□ 0.57
KRT4P19013 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT4P19013 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT4P19013 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
KRT4P19013 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.64■□□□□ 0.57
KRT4P19013 AC004264.1-201ENST00000608354 794 ntBASIC18.64■□□□□ 0.57
KRT4P19013 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KRT4P19013 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT4P19013 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT4P19013 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT4P19013 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms