Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 DHDH-204ENST00000523250 634 ntTSL 5 BASIC31.77■■■□□ 2.68
CFTRP13569 AC009533.2-201ENST00000543664 586 ntBASIC31.77■■■□□ 2.68
CFTRP13569 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.68
CFTRP13569 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC31.76■■■□□ 2.68
CFTRP13569 HLA-J-201ENST00000462773 1622 ntBASIC31.76■■■□□ 2.68
CFTRP13569 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.68
CFTRP13569 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC31.76■■■□□ 2.67
CFTRP13569 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CFTRP13569 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC31.76■■■□□ 2.67
CFTRP13569 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CFTRP13569 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC31.76■■■□□ 2.67
CFTRP13569 AL163051.1-201ENST00000569214 1512 ntBASIC31.76■■■□□ 2.67
CFTRP13569 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CFTRP13569 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CFTRP13569 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC31.75■■■□□ 2.67
CFTRP13569 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CFTRP13569 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC31.75■■■□□ 2.67
CFTRP13569 ABCD1P5-201ENST00000445663 754 ntBASIC31.75■■■□□ 2.67
CFTRP13569 KRT18P3-201ENST00000451602 1288 ntBASIC31.75■■■□□ 2.67
CFTRP13569 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC31.75■■■□□ 2.67
CFTRP13569 AC068472.1-201ENST00000474589 881 ntBASIC31.75■■■□□ 2.67
CFTRP13569 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CFTRP13569 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC31.75■■■□□ 2.67
CFTRP13569 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC31.75■■■□□ 2.67
CFTRP13569 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CFTRP13569 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC31.75■■■□□ 2.67
CFTRP13569 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CFTRP13569 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CFTRP13569 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CFTRP13569 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
CFTRP13569 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CFTRP13569 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CFTRP13569 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CFTRP13569 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CFTRP13569 KIRREL3-AS3-201ENST00000404882 831 ntBASIC31.74■■■□□ 2.67
CFTRP13569 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC31.74■■■□□ 2.67
CFTRP13569 DNAJB3-201ENST00000446806 729 ntBASIC31.74■■■□□ 2.67
CFTRP13569 AC092910.1-201ENST00000482027 1129 ntBASIC31.74■■■□□ 2.67
CFTRP13569 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC31.74■■■□□ 2.67
CFTRP13569 AL139288.1-201ENST00000623748 933 ntBASIC31.74■■■□□ 2.67
CFTRP13569 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CFTRP13569 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CFTRP13569 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
CFTRP13569 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CFTRP13569 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CFTRP13569 AC112482.1-201ENST00000492080 688 ntBASIC31.73■■■□□ 2.67
CFTRP13569 OR7E14P-202ENST00000530490 1290 ntBASIC31.73■■■□□ 2.67
CFTRP13569 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CFTRP13569 FP475955.4-201ENST00000623131 1990 ntBASIC31.73■■■□□ 2.67
CFTRP13569 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CFTRP13569 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
CFTRP13569 HEIH-201ENST00000623091 1652 ntBASIC31.73■■■□□ 2.67
CFTRP13569 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC31.73■■■□□ 2.67
CFTRP13569 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CFTRP13569 AC125634.1-201ENST00000438758 1403 ntBASIC31.73■■■□□ 2.67
CFTRP13569 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC31.73■■■□□ 2.67
CFTRP13569 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC31.73■■■□□ 2.67
CFTRP13569 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CFTRP13569 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CFTRP13569 RAB17-203ENST00000409576 466 ntTSL 3 BASIC31.72■■■□□ 2.67
CFTRP13569 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC31.72■■■□□ 2.67
CFTRP13569 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC31.72■■■□□ 2.67
CFTRP13569 CYGB-205ENST00000590175 830 ntTSL 3 BASIC31.72■■■□□ 2.67
CFTRP13569 AC134684.3-201ENST00000641758 218 ntBASIC31.72■■■□□ 2.67
CFTRP13569 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
CFTRP13569 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC31.72■■■□□ 2.67
CFTRP13569 PWWP2AP1-201ENST00000429776 2273 ntBASIC31.72■■■□□ 2.67
CFTRP13569 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC31.72■■■□□ 2.67
CFTRP13569 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC31.72■■■□□ 2.67
CFTRP13569 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CFTRP13569 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CFTRP13569 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CFTRP13569 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CFTRP13569 PMP22-202ENST00000395936 816 ntTSL 3 BASIC31.72■■■□□ 2.67
CFTRP13569 AP006288.1-201ENST00000446065 395 ntBASIC31.72■■■□□ 2.67
CFTRP13569 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC31.72■■■□□ 2.67
CFTRP13569 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC31.72■■■□□ 2.67
CFTRP13569 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CFTRP13569 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC31.71■■■□□ 2.67
CFTRP13569 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CFTRP13569 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC31.71■■■□□ 2.67
CFTRP13569 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CFTRP13569 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC31.71■■■□□ 2.67
CFTRP13569 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CFTRP13569 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CFTRP13569 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC31.71■■■□□ 2.67
CFTRP13569 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
CFTRP13569 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC31.71■■■□□ 2.67
CFTRP13569 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC31.7■■■□□ 2.67
CFTRP13569 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CFTRP13569 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CFTRP13569 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CFTRP13569 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC31.7■■■□□ 2.67
CFTRP13569 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC31.7■■■□□ 2.67
CFTRP13569 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CFTRP13569 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
CFTRP13569 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CFTRP13569 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC31.7■■■□□ 2.66
CFTRP13569 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC31.7■■■□□ 2.66
CFTRP13569 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC31.7■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms