Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VTNP04004 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
VTNP04004 AC005332.3-201ENST00000589904 676 ntBASIC20.35■□□□□ 0.85
VTNP04004 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.35■□□□□ 0.85
VTNP04004 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VTNP04004 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VTNP04004 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VTNP04004 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.35■□□□□ 0.85
VTNP04004 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VTNP04004 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
VTNP04004 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.34■□□□□ 0.85
VTNP04004 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.34■□□□□ 0.85
VTNP04004 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.34■□□□□ 0.85
VTNP04004 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
VTNP04004 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.34■□□□□ 0.85
VTNP04004 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.34■□□□□ 0.85
VTNP04004 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.34■□□□□ 0.85
VTNP04004 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.34■□□□□ 0.85
VTNP04004 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.34■□□□□ 0.85
VTNP04004 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.34■□□□□ 0.85
VTNP04004 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.34■□□□□ 0.85
VTNP04004 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
VTNP04004 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.34■□□□□ 0.85
VTNP04004 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.34■□□□□ 0.85
VTNP04004 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VTNP04004 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
VTNP04004 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
VTNP04004 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VTNP04004 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VTNP04004 KRT18P1-202ENST00000452408 1331 ntBASIC20.33■□□□□ 0.85
VTNP04004 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VTNP04004 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VTNP04004 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VTNP04004 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
VTNP04004 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VTNP04004 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VTNP04004 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.33■□□□□ 0.85
VTNP04004 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VTNP04004 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.33■□□□□ 0.85
VTNP04004 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.33■□□□□ 0.85
VTNP04004 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.33■□□□□ 0.85
VTNP04004 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.33■□□□□ 0.85
VTNP04004 MIR3652-201ENST00000579335 131 ntBASIC20.33■□□□□ 0.85
VTNP04004 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VTNP04004 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
VTNP04004 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VTNP04004 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VTNP04004 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VTNP04004 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.33■□□□□ 0.84
VTNP04004 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VTNP04004 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VTNP04004 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VTNP04004 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
VTNP04004 SLC25A24-204ENST00000569674 2357 ntBASIC20.32■□□□□ 0.84
VTNP04004 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.32■□□□□ 0.84
VTNP04004 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VTNP04004 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.32■□□□□ 0.84
VTNP04004 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
VTNP04004 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
VTNP04004 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
VTNP04004 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTNP04004 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
VTNP04004 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.31■□□□□ 0.84
VTNP04004 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.31■□□□□ 0.84
VTNP04004 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
VTNP04004 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.31■□□□□ 0.84
VTNP04004 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms