Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFBP01127 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFBP01127 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFBP01127 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.64■□□□□ 0.57
PDGFBP01127 UNC93B6-202ENST00000528242 690 ntBASIC18.64■□□□□ 0.57
PDGFBP01127 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.64■□□□□ 0.57
PDGFBP01127 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.64■□□□□ 0.57
PDGFBP01127 AC002347.1-201ENST00000569543 541 ntBASIC18.64■□□□□ 0.57
PDGFBP01127 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.64■□□□□ 0.57
PDGFBP01127 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFBP01127 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFBP01127 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.63■□□□□ 0.57
PDGFBP01127 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PDGFBP01127 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PDGFBP01127 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFBP01127 FAM8A3P-201ENST00000427218 844 ntBASIC18.63■□□□□ 0.57
PDGFBP01127 AP006288.1-201ENST00000446065 395 ntBASIC18.63■□□□□ 0.57
PDGFBP01127 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFBP01127 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFBP01127 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 AC025062.2-201ENST00000605477 670 ntBASIC18.63■□□□□ 0.57
PDGFBP01127 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFBP01127 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFBP01127 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFBP01127 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFBP01127 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFBP01127 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PDGFBP01127 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDGFBP01127 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PDGFBP01127 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDGFBP01127 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.62■□□□□ 0.57
PDGFBP01127 AL035633.1-201ENST00000406139 838 ntBASIC18.62■□□□□ 0.57
PDGFBP01127 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.62■□□□□ 0.57
PDGFBP01127 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.62■□□□□ 0.57
PDGFBP01127 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.62■□□□□ 0.57
PDGFBP01127 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PDGFBP01127 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.62■□□□□ 0.57
PDGFBP01127 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.62■□□□□ 0.57
PDGFBP01127 AC092364.2-202ENST00000597012 1073 ntBASIC18.62■□□□□ 0.57
PDGFBP01127 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDGFBP01127 AP005117.1-201ENST00000584346 1413 ntBASIC18.62■□□□□ 0.57
PDGFBP01127 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.62■□□□□ 0.57
PDGFBP01127 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.62■□□□□ 0.57
PDGFBP01127 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.62■□□□□ 0.57
PDGFBP01127 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PDGFBP01127 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFBP01127 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFBP01127 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.61■□□□□ 0.57
PDGFBP01127 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.61■□□□□ 0.57
PDGFBP01127 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PDGFBP01127 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.61■□□□□ 0.57
PDGFBP01127 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFBP01127 AP002414.3-201ENST00000589352 1468 ntBASIC18.61■□□□□ 0.57
PDGFBP01127 AC112777.1-201ENST00000540175 1423 ntBASIC18.61■□□□□ 0.57
PDGFBP01127 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PDGFBP01127 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PDGFBP01127 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 AC244107.1-201ENST00000442033 332 ntBASIC18.61■□□□□ 0.57
PDGFBP01127 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.61■□□□□ 0.57
PDGFBP01127 AC009533.2-201ENST00000543664 586 ntBASIC18.61■□□□□ 0.57
PDGFBP01127 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFBP01127 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFBP01127 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
PDGFBP01127 LINC01521-201ENST00000504184 1943 ntBASIC18.61■□□□□ 0.57
PDGFBP01127 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFBP01127 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms