Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTDNEP1O95476 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.53■■□□□ 1.04
CTDNEP1O95476 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CTDNEP1O95476 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.53■■□□□ 1.04
CTDNEP1O95476 AL133373.2-201ENST00000623187 2828 ntBASIC21.53■■□□□ 1.04
CTDNEP1O95476 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.53■■□□□ 1.04
CTDNEP1O95476 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.53■■□□□ 1.04
CTDNEP1O95476 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.53■■□□□ 1.04
CTDNEP1O95476 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CTDNEP1O95476 HOXB1-202ENST00000577092 1414 ntBASIC21.53■■□□□ 1.04
CTDNEP1O95476 SDHAP2-201ENST00000455183 2001 ntBASIC21.53■■□□□ 1.04
CTDNEP1O95476 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTDNEP1O95476 AC018470.1-201ENST00000624790 3129 ntBASIC21.53■■□□□ 1.04
CTDNEP1O95476 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTDNEP1O95476 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTDNEP1O95476 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.52■■□□□ 1.04
CTDNEP1O95476 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTDNEP1O95476 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTDNEP1O95476 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.52■■□□□ 1.03
CTDNEP1O95476 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.52■■□□□ 1.03
CTDNEP1O95476 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.52■■□□□ 1.03
CTDNEP1O95476 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 ECEL1P2-202ENST00000465689 757 ntBASIC21.51■■□□□ 1.03
CTDNEP1O95476 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTDNEP1O95476 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.51■■□□□ 1.03
CTDNEP1O95476 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTDNEP1O95476 AL163051.1-201ENST00000569214 1512 ntBASIC21.5■■□□□ 1.03
CTDNEP1O95476 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTDNEP1O95476 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTDNEP1O95476 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTDNEP1O95476 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTDNEP1O95476 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 KRT18P23-201ENST00000435622 1283 ntBASIC21.5■■□□□ 1.03
CTDNEP1O95476 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTDNEP1O95476 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.5■■□□□ 1.03
CTDNEP1O95476 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 NAPSB-206ENST00000562112 1266 ntBASIC21.5■■□□□ 1.03
CTDNEP1O95476 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTDNEP1O95476 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.5■■□□□ 1.03
CTDNEP1O95476 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms