Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.65■□□□□ 0.58
GPC4O75487 AC097488.1-201ENST00000507834 756 ntBASIC18.65■□□□□ 0.58
GPC4O75487 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
GPC4O75487 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.65■□□□□ 0.58
GPC4O75487 AL355075.4-201ENST00000554988 638 ntBASIC18.65■□□□□ 0.58
GPC4O75487 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.65■□□□□ 0.58
GPC4O75487 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GPC4O75487 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.65■□□□□ 0.58
GPC4O75487 AL031598.1-201ENST00000561511 1773 ntBASIC18.65■□□□□ 0.58
GPC4O75487 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.65■□□□□ 0.58
GPC4O75487 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
GPC4O75487 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.65■□□□□ 0.58
GPC4O75487 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GPC4O75487 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
GPC4O75487 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
GPC4O75487 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
GPC4O75487 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.64■□□□□ 0.57
GPC4O75487 UNC93B2-201ENST00000285383 730 ntBASIC18.64■□□□□ 0.57
GPC4O75487 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.64■□□□□ 0.57
GPC4O75487 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GPC4O75487 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.64■□□□□ 0.57
GPC4O75487 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.64■□□□□ 0.57
GPC4O75487 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.64■□□□□ 0.57
GPC4O75487 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.64■□□□□ 0.57
GPC4O75487 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.64■□□□□ 0.57
GPC4O75487 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.64■□□□□ 0.57
GPC4O75487 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.64■□□□□ 0.57
GPC4O75487 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.64■□□□□ 0.57
GPC4O75487 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.64■□□□□ 0.57
GPC4O75487 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 LETM1P2-201ENST00000597330 2178 ntBASIC18.64■□□□□ 0.57
GPC4O75487 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC4O75487 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.63■□□□□ 0.57
GPC4O75487 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GPC4O75487 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC4O75487 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.63■□□□□ 0.57
GPC4O75487 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.63■□□□□ 0.57
GPC4O75487 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC4O75487 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.63■□□□□ 0.57
GPC4O75487 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.63■□□□□ 0.57
GPC4O75487 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GPC4O75487 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.63■□□□□ 0.57
GPC4O75487 SLC25A1P4-201ENST00000567977 778 ntBASIC18.63■□□□□ 0.57
GPC4O75487 AP005242.2-201ENST00000580065 1175 ntBASIC18.63■□□□□ 0.57
GPC4O75487 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.63■□□□□ 0.57
GPC4O75487 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC4O75487 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC4O75487 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC4O75487 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.63■□□□□ 0.57
GPC4O75487 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.63■□□□□ 0.57
GPC4O75487 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC4O75487 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC4O75487 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.63■□□□□ 0.57
GPC4O75487 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC4O75487 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.63■□□□□ 0.57
GPC4O75487 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC4O75487 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
GPC4O75487 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC4O75487 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC4O75487 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GPC4O75487 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GPC4O75487 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 MFAP1P1-201ENST00000442257 1255 ntBASIC18.62■□□□□ 0.57
GPC4O75487 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC4O75487 TSPY15P-201ENST00000457163 923 ntBASIC18.62■□□□□ 0.57
GPC4O75487 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC4O75487 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.62■□□□□ 0.57
GPC4O75487 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC4O75487 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.62■□□□□ 0.57
GPC4O75487 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC4O75487 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.62■□□□□ 0.57
GPC4O75487 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC4O75487 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms