Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC8.27□□□□□ -1.09
USH2AO75445 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC8.27□□□□□ -1.09
USH2AO75445 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC8.27□□□□□ -1.09
USH2AO75445 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC8.27□□□□□ -1.09
USH2AO75445 AC236430.1-201ENST00000402231 743 ntBASIC8.27□□□□□ -1.09
USH2AO75445 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC8.27□□□□□ -1.09
USH2AO75445 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC8.27□□□□□ -1.09
USH2AO75445 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC8.27□□□□□ -1.09
USH2AO75445 PUS1-205ENST00000535067 838 ntTSL 3 BASIC8.27□□□□□ -1.09
USH2AO75445 ELL2P1-201ENST00000413990 1906 ntBASIC8.27□□□□□ -1.09
USH2AO75445 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC8.27□□□□□ -1.09
USH2AO75445 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC8.27□□□□□ -1.09
USH2AO75445 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC8.27□□□□□ -1.09
USH2AO75445 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC8.26□□□□□ -1.09
USH2AO75445 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
USH2AO75445 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 AC092720.2-201ENST00000602388 1665 ntBASIC8.26□□□□□ -1.09
USH2AO75445 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 AL691432.2-201ENST00000607222 2038 ntBASIC8.26□□□□□ -1.09
USH2AO75445 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
USH2AO75445 NOP2-211ENST00000540228 668 ntTSL 2 BASIC8.26□□□□□ -1.09
USH2AO75445 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC8.26□□□□□ -1.09
USH2AO75445 AP002414.3-201ENST00000589352 1468 ntBASIC8.26□□□□□ -1.09
USH2AO75445 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
USH2AO75445 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 GUSBP5-202ENST00000510805 1989 ntBASIC8.26□□□□□ -1.09
USH2AO75445 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC8.26□□□□□ -1.09
USH2AO75445 AC233723.2-201ENST00000623798 2106 ntBASIC8.26□□□□□ -1.09
USH2AO75445 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
USH2AO75445 OR8S1-201ENST00000310194 1080 ntBASIC8.26□□□□□ -1.09
USH2AO75445 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 MRPL20P1-201ENST00000400819 433 ntBASIC8.26□□□□□ -1.09
USH2AO75445 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC8.26□□□□□ -1.09
USH2AO75445 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC8.26□□□□□ -1.09
USH2AO75445 AP005018.1-201ENST00000525475 301 ntBASIC8.26□□□□□ -1.09
USH2AO75445 AC087641.1-201ENST00000557561 1021 ntBASIC8.26□□□□□ -1.09
USH2AO75445 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC8.26□□□□□ -1.09
USH2AO75445 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC8.26□□□□□ -1.09
USH2AO75445 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC8.26□□□□□ -1.09
USH2AO75445 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC8.26□□□□□ -1.09
USH2AO75445 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 TEN1-204ENST00000588202 862 ntTSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC8.26□□□□□ -1.09
USH2AO75445 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
USH2AO75445 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
USH2AO75445 SLBP-205ENST00000488267 987 ntTSL 2 BASIC8.26□□□□□ -1.09
USH2AO75445 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 DUX4L27-201ENST00000554796 1261 ntBASIC8.26□□□□□ -1.09
USH2AO75445 SDCCAG3P1-201ENST00000589292 1150 ntBASIC8.26□□□□□ -1.09
USH2AO75445 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC8.26□□□□□ -1.09
USH2AO75445 AL138831.2-201ENST00000606564 490 ntBASIC8.26□□□□□ -1.09
USH2AO75445 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 FEM1AP4-201ENST00000443167 1987 ntBASIC8.25□□□□□ -1.09
USH2AO75445 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC8.25□□□□□ -1.09
USH2AO75445 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC8.25□□□□□ -1.09
USH2AO75445 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
USH2AO75445 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC8.25□□□□□ -1.09
USH2AO75445 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
USH2AO75445 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
USH2AO75445 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC8.25□□□□□ -1.09
USH2AO75445 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC8.25□□□□□ -1.09
USH2AO75445 AL049796.1-201ENST00000565336 1766 ntBASIC8.25□□□□□ -1.09
USH2AO75445 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
USH2AO75445 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms