Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXD2O60548 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXD2O60548 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
FOXD2O60548 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXD2O60548 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
FOXD2O60548 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 LINC00265-3P-201ENST00000447588 903 ntBASIC18.68■□□□□ 0.58
FOXD2O60548 AC104819.1-201ENST00000504587 486 ntBASIC18.68■□□□□ 0.58
FOXD2O60548 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.68■□□□□ 0.58
FOXD2O60548 TPSP2-201ENST00000561760 610 ntBASIC18.68■□□□□ 0.58
FOXD2O60548 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXD2O60548 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FOXD2O60548 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXD2O60548 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
FOXD2O60548 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXD2O60548 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXD2O60548 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 KRT8P11-201ENST00000409686 1436 ntBASIC18.67■□□□□ 0.58
FOXD2O60548 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXD2O60548 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
FOXD2O60548 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FOXD2O60548 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXD2O60548 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXD2O60548 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXD2O60548 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
FOXD2O60548 FAM220CP-201ENST00000395253 831 ntBASIC18.67■□□□□ 0.58
FOXD2O60548 AL590627.1-203ENST00000421194 1026 ntBASIC18.67■□□□□ 0.58
FOXD2O60548 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXD2O60548 FOSL1P1-201ENST00000511041 816 ntBASIC18.67■□□□□ 0.58
FOXD2O60548 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.67■□□□□ 0.58
FOXD2O60548 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXD2O60548 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FOXD2O60548 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXD2O60548 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FOXD2O60548 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 AP001271.2-201ENST00000624018 1556 ntBASIC18.67■□□□□ 0.58
FOXD2O60548 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXD2O60548 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FOXD2O60548 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FOXD2O60548 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXD2O60548 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
FOXD2O60548 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FOXD2O60548 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.66■□□□□ 0.58
FOXD2O60548 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
FOXD2O60548 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
FOXD2O60548 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXD2O60548 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.66■□□□□ 0.58
FOXD2O60548 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXD2O60548 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXD2O60548 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXD2O60548 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXD2O60548 AC125437.2-201ENST00000625180 2167 ntBASIC18.65■□□□□ 0.58
FOXD2O60548 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXD2O60548 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXD2O60548 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXD2O60548 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.65■□□□□ 0.58
FOXD2O60548 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXD2O60548 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXD2O60548 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXD2O60548 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms