Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AC093909.1-201ENST00000504731 1122 ntBASIC17.53■□□□□ 0.4
URB1O60287 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 MIR3180-5-201ENST00000583743 153 ntBASIC17.53■□□□□ 0.4
URB1O60287 AL592071.1-201ENST00000611956 408 ntBASIC17.53■□□□□ 0.4
URB1O60287 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.53■□□□□ 0.4
URB1O60287 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.53■□□□□ 0.4
URB1O60287 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
URB1O60287 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.53■□□□□ 0.4
URB1O60287 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.52■□□□□ 0.4
URB1O60287 UPF3AP3-201ENST00000420996 769 ntBASIC17.52■□□□□ 0.4
URB1O60287 HTR5BP-201ENST00000430851 1154 ntBASIC17.52■□□□□ 0.4
URB1O60287 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.52■□□□□ 0.4
URB1O60287 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.52■□□□□ 0.4
URB1O60287 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.52■□□□□ 0.4
URB1O60287 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.52■□□□□ 0.4
URB1O60287 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.52■□□□□ 0.4
URB1O60287 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 AC104417.2-201ENST00000562989 1793 ntBASIC17.52■□□□□ 0.4
URB1O60287 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.52■□□□□ 0.4
URB1O60287 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.52■□□□□ 0.4
URB1O60287 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.52■□□□□ 0.4
URB1O60287 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.52■□□□□ 0.4
URB1O60287 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.52■□□□□ 0.4
URB1O60287 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
URB1O60287 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.52■□□□□ 0.4
URB1O60287 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
URB1O60287 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
URB1O60287 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
URB1O60287 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
URB1O60287 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
URB1O60287 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.52■□□□□ 0.39
URB1O60287 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.52■□□□□ 0.39
URB1O60287 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
URB1O60287 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
URB1O60287 KRT18P23-201ENST00000435622 1283 ntBASIC17.51■□□□□ 0.39
URB1O60287 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.51■□□□□ 0.39
URB1O60287 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
URB1O60287 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.51■□□□□ 0.39
URB1O60287 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.51■□□□□ 0.39
URB1O60287 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.51■□□□□ 0.39
URB1O60287 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.51■□□□□ 0.39
URB1O60287 AC124864.1-201ENST00000623408 392 ntBASIC17.51■□□□□ 0.39
URB1O60287 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.51■□□□□ 0.39
URB1O60287 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
URB1O60287 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
URB1O60287 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.51■□□□□ 0.39
URB1O60287 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
URB1O60287 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.51■□□□□ 0.39
URB1O60287 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.51■□□□□ 0.39
URB1O60287 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
URB1O60287 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.51■□□□□ 0.39
URB1O60287 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
URB1O60287 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.51■□□□□ 0.39
URB1O60287 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.51■□□□□ 0.39
URB1O60287 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.51■□□□□ 0.39
URB1O60287 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
URB1O60287 ZNF259P1-201ENST00000407656 1365 ntBASIC17.51■□□□□ 0.39
URB1O60287 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
URB1O60287 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
URB1O60287 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
URB1O60287 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
URB1O60287 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
URB1O60287 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.5■□□□□ 0.39
URB1O60287 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
URB1O60287 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.5■□□□□ 0.39
URB1O60287 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
URB1O60287 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
URB1O60287 AC098831.1-202ENST00000438821 336 ntBASIC17.5■□□□□ 0.39
URB1O60287 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.5■□□□□ 0.39
URB1O60287 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.5■□□□□ 0.39
URB1O60287 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
URB1O60287 AL591684.3-201ENST00000605187 298 ntBASIC17.5■□□□□ 0.39
URB1O60287 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms