Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CHD1O14646 KRT8P50-201ENST00000562022 1438 ntBASIC30.01■■■□□ 2.39
CHD1O14646 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC30.01■■■□□ 2.39
CHD1O14646 KRT18P2-201ENST00000447938 1258 ntBASIC30.01■■■□□ 2.39
CHD1O14646 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC30.01■■■□□ 2.39
CHD1O14646 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
CHD1O14646 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC30.01■■■□□ 2.39
CHD1O14646 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CHD1O14646 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
CHD1O14646 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC30■■■□□ 2.39
CHD1O14646 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC30■■■□□ 2.39
CHD1O14646 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CHD1O14646 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC30■■■□□ 2.39
CHD1O14646 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC30■■■□□ 2.39
CHD1O14646 AL078644.1-201ENST00000609881 752 ntBASIC30■■■□□ 2.39
CHD1O14646 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC30■■■□□ 2.39
CHD1O14646 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CHD1O14646 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHD1O14646 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
CHD1O14646 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHD1O14646 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CHD1O14646 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC30■■■□□ 2.39
CHD1O14646 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CHD1O14646 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC29.99■■■□□ 2.39
CHD1O14646 PNKD-204ENST00000436005 978 ntTSL 5 BASIC29.99■■■□□ 2.39
CHD1O14646 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
CHD1O14646 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC29.99■■■□□ 2.39
CHD1O14646 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC29.99■■■□□ 2.39
CHD1O14646 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHD1O14646 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC29.99■■■□□ 2.39
CHD1O14646 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHD1O14646 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHD1O14646 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
CHD1O14646 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
CHD1O14646 AC093028.1-201ENST00000622998 982 ntBASIC29.99■■■□□ 2.39
CHD1O14646 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHD1O14646 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHD1O14646 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC29.98■■■□□ 2.39
CHD1O14646 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
CHD1O14646 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1O14646 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1O14646 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
CHD1O14646 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC29.98■■■□□ 2.39
CHD1O14646 AL512408.1-201ENST00000569378 2000 ntBASIC29.98■■■□□ 2.39
CHD1O14646 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1O14646 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1O14646 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1O14646 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC29.98■■■□□ 2.39
CHD1O14646 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
CHD1O14646 KRT8P32-201ENST00000512863 1461 ntBASIC29.98■■■□□ 2.39
CHD1O14646 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHD1O14646 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1O14646 PTMS-202ENST00000389462 773 ntTSL 2 BASIC29.97■■■□□ 2.39
CHD1O14646 AC073621.1-201ENST00000392730 636 ntBASIC29.97■■■□□ 2.39
CHD1O14646 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC29.97■■■□□ 2.39
CHD1O14646 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1O14646 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1O14646 COX5A-204ENST00000567270 579 ntTSL 3 BASIC29.97■■■□□ 2.39
CHD1O14646 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
CHD1O14646 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
CHD1O14646 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1O14646 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC29.97■■■□□ 2.39
CHD1O14646 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1O14646 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
CHD1O14646 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1O14646 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1O14646 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
CHD1O14646 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC29.97■■■□□ 2.39
CHD1O14646 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC29.97■■■□□ 2.39
CHD1O14646 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC29.97■■■□□ 2.39
CHD1O14646 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CHD1O14646 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
CHD1O14646 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC29.96■■■□□ 2.39
CHD1O14646 PUS1-205ENST00000535067 838 ntTSL 3 BASIC29.96■■■□□ 2.39
CHD1O14646 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC29.96■■■□□ 2.39
CHD1O14646 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC29.96■■■□□ 2.39
CHD1O14646 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 NKAPP1-205ENST00000585790 367 ntBASIC29.96■■■□□ 2.39
CHD1O14646 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC29.96■■■□□ 2.39
CHD1O14646 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHD1O14646 NARF-204ENST00000390006 1766 ntTSL 2 BASIC29.95■■■□□ 2.39
CHD1O14646 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
CHD1O14646 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CHD1O14646 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CHD1O14646 FUOM-202ENST00000368551 628 ntTSL 3 BASIC29.95■■■□□ 2.38
CHD1O14646 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC29.95■■■□□ 2.38
CHD1O14646 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC29.95■■■□□ 2.38
CHD1O14646 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC29.95■■■□□ 2.38
CHD1O14646 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms