Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC31.72■■■□□ 2.67
CUX2O14529 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC31.72■■■□□ 2.67
CUX2O14529 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
CUX2O14529 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC31.72■■■□□ 2.67
CUX2O14529 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CUX2O14529 AL606495.2-201ENST00000605867 535 ntBASIC31.72■■■□□ 2.67
CUX2O14529 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CUX2O14529 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CUX2O14529 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CUX2O14529 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC31.72■■■□□ 2.67
CUX2O14529 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC31.72■■■□□ 2.67
CUX2O14529 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
CUX2O14529 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CUX2O14529 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CUX2O14529 GSAP-205ENST00000430584 600 ntTSL 5 BASIC31.72■■■□□ 2.67
CUX2O14529 SIGLEC30P-201ENST00000455569 941 ntBASIC31.72■■■□□ 2.67
CUX2O14529 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC31.72■■■□□ 2.67
CUX2O14529 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC31.72■■■□□ 2.67
CUX2O14529 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC31.72■■■□□ 2.67
CUX2O14529 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC31.71■■■□□ 2.67
CUX2O14529 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC31.71■■■□□ 2.67
CUX2O14529 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CUX2O14529 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CUX2O14529 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CUX2O14529 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC31.71■■■□□ 2.67
CUX2O14529 ELL2P1-201ENST00000413990 1906 ntBASIC31.71■■■□□ 2.67
CUX2O14529 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC31.71■■■□□ 2.67
CUX2O14529 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC31.71■■■□□ 2.67
CUX2O14529 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC31.71■■■□□ 2.67
CUX2O14529 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CUX2O14529 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC31.71■■■□□ 2.67
CUX2O14529 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC31.71■■■□□ 2.67
CUX2O14529 AC087641.1-201ENST00000557561 1021 ntBASIC31.71■■■□□ 2.67
CUX2O14529 AL139288.1-201ENST00000623748 933 ntBASIC31.71■■■□□ 2.67
CUX2O14529 AC107918.4-202ENST00000641623 219 ntBASIC31.71■■■□□ 2.67
CUX2O14529 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC31.71■■■□□ 2.67
CUX2O14529 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CUX2O14529 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CUX2O14529 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CUX2O14529 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CUX2O14529 AP005117.1-201ENST00000584346 1413 ntBASIC31.7■■■□□ 2.67
CUX2O14529 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
CUX2O14529 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CUX2O14529 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CUX2O14529 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC31.7■■■□□ 2.67
CUX2O14529 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC31.7■■■□□ 2.66
CUX2O14529 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CUX2O14529 AC245100.3-201ENST00000441281 285 ntBASIC31.7■■■□□ 2.66
CUX2O14529 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC31.7■■■□□ 2.66
CUX2O14529 AQP6-205ENST00000618286 829 ntTSL 5 BASIC31.7■■■□□ 2.66
CUX2O14529 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
CUX2O14529 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CUX2O14529 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CUX2O14529 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC31.69■■■□□ 2.66
CUX2O14529 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CUX2O14529 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC31.69■■■□□ 2.66
CUX2O14529 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC31.69■■■□□ 2.66
CUX2O14529 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CUX2O14529 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CUX2O14529 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CUX2O14529 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CUX2O14529 RBSN-204ENST00000449050 903 ntTSL 2 BASIC31.69■■■□□ 2.66
CUX2O14529 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC31.69■■■□□ 2.66
CUX2O14529 INO80C-206ENST00000586489 594 ntTSL 3 BASIC31.69■■■□□ 2.66
CUX2O14529 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CUX2O14529 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CUX2O14529 TP73-AS1-210ENST00000637775 1455 ntBASIC31.68■■■□□ 2.66
CUX2O14529 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CUX2O14529 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC31.68■■■□□ 2.66
CUX2O14529 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CUX2O14529 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
CUX2O14529 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CUX2O14529 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC31.68■■■□□ 2.66
CUX2O14529 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CUX2O14529 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CUX2O14529 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
CUX2O14529 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC31.68■■■□□ 2.66
CUX2O14529 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CUX2O14529 AL139400.1-201ENST00000366220 510 ntBASIC31.67■■■□□ 2.66
CUX2O14529 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
CUX2O14529 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC31.67■■■□□ 2.66
CUX2O14529 AJ011932.1-201ENST00000621707 465 ntBASIC31.67■■■□□ 2.66
CUX2O14529 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CUX2O14529 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CUX2O14529 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CUX2O14529 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
CUX2O14529 HEIH-201ENST00000623091 1652 ntBASIC31.67■■■□□ 2.66
CUX2O14529 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
CUX2O14529 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CUX2O14529 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC31.67■■■□□ 2.66
CUX2O14529 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CUX2O14529 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC31.67■■■□□ 2.66
CUX2O14529 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CUX2O14529 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CUX2O14529 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC31.66■■■□□ 2.66
CUX2O14529 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC31.66■■■□□ 2.66
CUX2O14529 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CUX2O14529 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
CUX2O14529 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CUX2O14529 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms