Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 AL353807.1-201ENST00000427475 662 ntBASIC19.26■□□□□ 0.67
SRRM3A6NNA2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 AL450487.1-201ENST00000426799 995 ntBASIC19.25■□□□□ 0.67
SRRM3A6NNA2 DUSP5P1-201ENST00000441325 1139 ntBASIC19.25■□□□□ 0.67
SRRM3A6NNA2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 NUDT16P1-203ENST00000513809 620 ntBASIC19.25■□□□□ 0.67
SRRM3A6NNA2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 REXO1L10P-201ENST00000615707 1290 ntBASIC19.25■□□□□ 0.67
SRRM3A6NNA2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 AC099398.1-201ENST00000567919 2776 ntBASIC19.25■□□□□ 0.67
SRRM3A6NNA2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.25■□□□□ 0.67
SRRM3A6NNA2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 AC010203.1-204ENST00000548782 407 ntBASIC19.24■□□□□ 0.67
SRRM3A6NNA2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 AC005829.2-201ENST00000571422 1056 ntBASIC19.24■□□□□ 0.67
SRRM3A6NNA2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.24■□□□□ 0.67
SRRM3A6NNA2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 ZNF815P-204ENST00000434898 1737 ntBASIC19.23■□□□□ 0.67
SRRM3A6NNA2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.23■□□□□ 0.67
SRRM3A6NNA2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.23■□□□□ 0.67
SRRM3A6NNA2 AL390955.1-201ENST00000428694 934 ntBASIC19.23■□□□□ 0.67
SRRM3A6NNA2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms