Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RPL13AP23-201ENST00000480739 586 ntBASIC25.15■■□□□ 1.62
SBNO1A3KN83 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SBNO1A3KN83 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC25.15■■□□□ 1.62
SBNO1A3KN83 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC25.15■■□□□ 1.62
SBNO1A3KN83 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SBNO1A3KN83 FEM1AP3-201ENST00000403722 1741 ntBASIC25.15■■□□□ 1.62
SBNO1A3KN83 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC25.15■■□□□ 1.62
SBNO1A3KN83 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SBNO1A3KN83 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SBNO1A3KN83 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
SBNO1A3KN83 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC25.14■■□□□ 1.62
SBNO1A3KN83 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.14■■□□□ 1.62
SBNO1A3KN83 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SBNO1A3KN83 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SBNO1A3KN83 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SBNO1A3KN83 ME2-218ENST00000640965 2476 ntTSL 5 BASIC25.14■■□□□ 1.62
SBNO1A3KN83 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SBNO1A3KN83 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
SBNO1A3KN83 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC25.14■■□□□ 1.61
SBNO1A3KN83 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
SBNO1A3KN83 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SBNO1A3KN83 SCARNA2-201ENST00000458748 420 ntBASIC25.14■■□□□ 1.61
SBNO1A3KN83 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
SBNO1A3KN83 AC068587.9-201ENST00000641814 219 ntBASIC25.14■■□□□ 1.61
SBNO1A3KN83 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
SBNO1A3KN83 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SBNO1A3KN83 UBQLN4P1-201ENST00000461599 1801 ntBASIC25.14■■□□□ 1.61
SBNO1A3KN83 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SBNO1A3KN83 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
SBNO1A3KN83 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SBNO1A3KN83 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SBNO1A3KN83 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SBNO1A3KN83 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SBNO1A3KN83 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
SBNO1A3KN83 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SBNO1A3KN83 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SBNO1A3KN83 PGAM5P1-201ENST00000518923 814 ntBASIC25.13■■□□□ 1.61
SBNO1A3KN83 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
SBNO1A3KN83 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC25.13■■□□□ 1.61
SBNO1A3KN83 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.13■■□□□ 1.61
SBNO1A3KN83 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.13■■□□□ 1.61
SBNO1A3KN83 POLI-202ENST00000406285 2030 ntTSL 2 BASIC25.12■■□□□ 1.61
SBNO1A3KN83 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SBNO1A3KN83 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC25.12■■□□□ 1.61
SBNO1A3KN83 RBM17P3-201ENST00000417687 1192 ntBASIC25.12■■□□□ 1.61
SBNO1A3KN83 AC132008.2-207ENST00000454517 770 ntBASIC25.12■■□□□ 1.61
SBNO1A3KN83 AC073648.2-201ENST00000510116 352 ntBASIC25.12■■□□□ 1.61
SBNO1A3KN83 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC25.12■■□□□ 1.61
SBNO1A3KN83 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC25.12■■□□□ 1.61
SBNO1A3KN83 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC25.12■■□□□ 1.61
SBNO1A3KN83 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SBNO1A3KN83 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SBNO1A3KN83 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SBNO1A3KN83 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC25.12■■□□□ 1.61
SBNO1A3KN83 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SBNO1A3KN83 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SBNO1A3KN83 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SBNO1A3KN83 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SBNO1A3KN83 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SBNO1A3KN83 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SBNO1A3KN83 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SBNO1A3KN83 HIST2H3DP1-201ENST00000401004 416 ntBASIC25.11■■□□□ 1.61
SBNO1A3KN83 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SBNO1A3KN83 HNRNPDP1-201ENST00000439535 754 ntBASIC25.11■■□□□ 1.61
SBNO1A3KN83 AC145285.3-201ENST00000564603 959 ntBASIC25.11■■□□□ 1.61
SBNO1A3KN83 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SBNO1A3KN83 AC005336.2-201ENST00000593183 939 ntBASIC25.11■■□□□ 1.61
SBNO1A3KN83 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SBNO1A3KN83 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SBNO1A3KN83 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC25.11■■□□□ 1.61
SBNO1A3KN83 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC25.1■■□□□ 1.61
SBNO1A3KN83 AC141586.3-201ENST00000562166 1838 ntBASIC25.1■■□□□ 1.61
SBNO1A3KN83 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC25.1■■□□□ 1.61
SBNO1A3KN83 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC25.1■■□□□ 1.61
SBNO1A3KN83 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC25.1■■□□□ 1.61
SBNO1A3KN83 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC25.1■■□□□ 1.61
SBNO1A3KN83 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC25.1■■□□□ 1.61
SBNO1A3KN83 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 ZNF259P1-201ENST00000407656 1365 ntBASIC25.1■■□□□ 1.61
SBNO1A3KN83 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms