Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCA3PQ9Y6N3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCA3PQ9Y6N3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCA3PQ9Y6N3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCA3PQ9Y6N3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCA3PQ9Y6N3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCA3PQ9Y6N3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCA3PQ9Y6N3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLCA3PQ9Y6N3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLCA3PQ9Y6N3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 FZD10-202ENST00000539839 3282 ntBASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 AL049812.1-201ENST00000432563 2267 ntBASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 AL512353.2-201ENST00000448759 1962 ntBASIC17.59■□□□□ 0.41
CLCA3PQ9Y6N3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.58■□□□□ 0.41
CLCA3PQ9Y6N3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCA3PQ9Y6N3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCA3PQ9Y6N3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCA3PQ9Y6N3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CLCA3PQ9Y6N3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 LTB4R2-202ENST00000528054 3092 ntBASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCA3PQ9Y6N3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 AC005521.1-201ENST00000393351 872 ntBASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 MCCD1P1-208ENST00000445732 328 ntBASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 GPAT2P1-201ENST00000444924 1672 ntBASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCA3PQ9Y6N3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms