Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 AC011270.2-201ENST00000624293 2550 ntBASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 GCSHP5-201ENST00000443090 522 ntBASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 AL359736.2-201ENST00000621992 437 ntBASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 AP006294.2-201ENST00000641667 209 ntBASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 Z98044.1-201ENST00000632503 1764 ntBASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3HCC1Q9Y3T6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.27■□□□□ 0.99
R3HCC1Q9Y3T6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
R3HCC1Q9Y3T6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
R3HCC1Q9Y3T6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 UBE2SP1-201ENST00000450587 669 ntBASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 TFP1-202ENST00000475455 1573 ntBASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3HCC1Q9Y3T6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 AC124016.1-201ENST00000609552 612 ntBASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 AC141586.5-201ENST00000624546 2050 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms