Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 AC092329.2-201ENST00000598402 547 ntBASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 TSSC2-201ENST00000450217 709 ntBASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 SEC1P-202ENST00000473944 940 ntBASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 MIR3652-201ENST00000579335 131 ntBASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSX2IPQ9Y2D8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 MIR3917-201ENST00000580971 93 ntBASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSX2IPQ9Y2D8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 AC026396.1-201ENST00000419388 421 ntBASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 AL109659.2-201ENST00000606809 1674 ntBASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 AC018445.3-201ENST00000624177 1945 ntBASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SSX2IPQ9Y2D8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SSX2IPQ9Y2D8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
SSX2IPQ9Y2D8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SSX2IPQ9Y2D8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSX2IPQ9Y2D8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX2IPQ9Y2D8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX2IPQ9Y2D8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
SSX2IPQ9Y2D8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms