Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 TSPY23P-201ENST00000440136 739 ntBASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 GCSHP2-201ENST00000560971 527 ntBASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 NEK4P2-201ENST00000580004 1012 ntBASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 MIR4674-201ENST00000582457 87 ntBASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 AC093458.2-201ENST00000623150 629 ntBASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 AC112907.2-201ENST00000448639 330 ntBASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 TNXA-203ENST00000507684 2038 ntBASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA1Q9UND3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 TSPY21P-201ENST00000433481 731 ntBASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 KRT18P56-201ENST00000507275 550 ntBASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 VENTXP5-201ENST00000523979 775 ntBASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 HTR7P1-202ENST00000624664 4411 ntBASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NPIPA1Q9UND3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NPIPA1Q9UND3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
NPIPA1Q9UND3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.14■□□□□ 0.34
NPIPA1Q9UND3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms