Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 GPAT2P1-201ENST00000444924 1672 ntBASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 AL109659.2-201ENST00000606809 1674 ntBASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPARGC1AQ9UBK2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 ECEL1P3-201ENST00000427961 737 ntBASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 SLC25A3P1-201ENST00000443844 931 ntBASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.38■□□□□ 0.69
PPARGC1AQ9UBK2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 RCC2P3-201ENST00000418112 1537 ntBASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 MCCD1P1-208ENST00000445732 328 ntBASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 AL512604.3-201ENST00000569583 964 ntBASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PPARGC1AQ9UBK2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 AC005363.2-201ENST00000618631 242 ntBASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 HEIH-201ENST00000623091 1652 ntBASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PPARGC1AQ9UBK2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 AC113347.1-201ENST00000413321 391 ntBASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 WWOX-216ENST00000569818 525 ntBASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 AC006333.2-201ENST00000607957 2099 ntBASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPARGC1AQ9UBK2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms