Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.06■□□□□ 0.16
TREM2Q9NZC2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 AC093525.10-201ENST00000625130 1569 ntBASIC16.06■□□□□ 0.16
TREM2Q9NZC2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 TSPY21P-201ENST00000433481 731 ntBASIC16.06■□□□□ 0.16
TREM2Q9NZC2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 CCR12P-201ENST00000446203 998 ntBASIC16.06■□□□□ 0.16
TREM2Q9NZC2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 AL049812.1-201ENST00000432563 2267 ntBASIC16.06■□□□□ 0.16
TREM2Q9NZC2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.06■□□□□ 0.16
TREM2Q9NZC2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 AC104076.2-201ENST00000448912 469 ntBASIC16.05■□□□□ 0.16
TREM2Q9NZC2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 FAM87A-204ENST00000613235 858 ntBASIC16.05■□□□□ 0.16
TREM2Q9NZC2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.05■□□□□ 0.16
TREM2Q9NZC2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREM2Q9NZC2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.04■□□□□ 0.16
TREM2Q9NZC2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TREM2Q9NZC2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms