Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 AC080080.1-201ENST00000625121 2420 ntBASIC18.03■□□□□ 0.48
NDE1Q9NXR1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NDE1Q9NXR1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 TUBB8P6-201ENST00000436895 1288 ntBASIC18.02■□□□□ 0.48
NDE1Q9NXR1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NDE1Q9NXR1 AC231657.2-201ENST00000624556 255 ntBASIC18.02■□□□□ 0.48
NDE1Q9NXR1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.02■□□□□ 0.47
NDE1Q9NXR1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NDE1Q9NXR1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NDE1Q9NXR1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NDE1Q9NXR1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.02■□□□□ 0.47
NDE1Q9NXR1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NDE1Q9NXR1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NDE1Q9NXR1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.02■□□□□ 0.47
NDE1Q9NXR1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NDE1Q9NXR1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18■□□□□ 0.47
NDE1Q9NXR1 AC138028.4-201ENST00000564984 1845 ntBASIC18■□□□□ 0.47
NDE1Q9NXR1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18■□□□□ 0.47
NDE1Q9NXR1 AL645608.8-201ENST00000606034 2086 ntBASIC18■□□□□ 0.47
NDE1Q9NXR1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18■□□□□ 0.47
NDE1Q9NXR1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NDE1Q9NXR1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18■□□□□ 0.47
NDE1Q9NXR1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18■□□□□ 0.47
NDE1Q9NXR1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18■□□□□ 0.47
NDE1Q9NXR1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NDE1Q9NXR1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18■□□□□ 0.47
NDE1Q9NXR1 AC005181.1-201ENST00000604782 1256 ntBASIC18■□□□□ 0.47
NDE1Q9NXR1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18■□□□□ 0.47
NDE1Q9NXR1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18■□□□□ 0.47
NDE1Q9NXR1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 AC135776.1-201ENST00000319817 2481 ntBASIC18■□□□□ 0.47
NDE1Q9NXR1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18■□□□□ 0.47
NDE1Q9NXR1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18■□□□□ 0.47
NDE1Q9NXR1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
NDE1Q9NXR1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDE1Q9NXR1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms