Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 TUBB8P6-201ENST00000436895 1288 ntBASIC21.44■■□□□ 1.02
RNF216Q9NWF9 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.44■■□□□ 1.02
RNF216Q9NWF9 AC108729.1-201ENST00000487812 947 ntBASIC21.44■■□□□ 1.02
RNF216Q9NWF9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 LINC00648-204ENST00000557749 443 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 OR10AE1P-201ENST00000606962 1029 ntBASIC21.44■■□□□ 1.02
RNF216Q9NWF9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 AL354892.3-201ENST00000586101 1630 ntBASIC21.44■■□□□ 1.02
RNF216Q9NWF9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 PTS-202ENST00000524931 696 ntTSL 3 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 PTS-204ENST00000525803 625 ntTSL 3 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 AC007494.2-201ENST00000563757 764 ntTSL 3 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 BNIP3P40-201ENST00000596017 556 ntBASIC21.43■■□□□ 1.02
RNF216Q9NWF9 AL139022.2-201ENST00000606934 443 ntBASIC21.43■■□□□ 1.02
RNF216Q9NWF9 AC131212.4-201ENST00000623606 975 ntBASIC21.43■■□□□ 1.02
RNF216Q9NWF9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF216Q9NWF9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 OR4C5-201ENST00000319813 981 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 MED20-203ENST00000409060 815 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 AC113347.1-201ENST00000413321 391 ntBASIC21.42■■□□□ 1.02
RNF216Q9NWF9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 AC068587.2-201ENST00000478386 781 ntBASIC21.42■■□□□ 1.02
RNF216Q9NWF9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 C2orf69P3-201ENST00000565542 1120 ntBASIC21.42■■□□□ 1.02
RNF216Q9NWF9 AL049597.2-201ENST00000565575 961 ntBASIC21.42■■□□□ 1.02
RNF216Q9NWF9 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF216Q9NWF9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF216Q9NWF9 TFP1-202ENST00000475455 1573 ntBASIC21.41■■□□□ 1.02
RNF216Q9NWF9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms