Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 SOX15-203ENST00000570788 1093 ntBASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 AC135776.1-201ENST00000319817 2481 ntBASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 KRT17P2-201ENST00000300992 1314 ntBASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 AC090340.1-201ENST00000620778 4980 ntBASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 AC133561.5-201ENST00000635547 218 ntBASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2LQ9NUG4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CCM2LQ9NUG4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CCM2LQ9NUG4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 AL390719.1-204ENST00000412397 1219 ntBASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 TSPY7P-201ENST00000431358 1114 ntBASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 AP006587.1-201ENST00000534129 1502 ntBASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2LQ9NUG4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 AC012313.1-201ENST00000593393 3059 ntBASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2LQ9NUG4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2LQ9NUG4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms