Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC073592.3-201ENST00000625118 1834 ntBASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 HOXB1-202ENST00000577092 1414 ntBASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 MYLKP1-201ENST00000509077 1580 ntBASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 AC005082.1-201ENST00000413042 2259 ntBASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN4Q9NRR5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 AC126763.1-201ENST00000552015 2118 ntBASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 AC090164.3-201ENST00000610780 2143 ntBASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN4Q9NRR5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms