Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SIX2Q9NPC8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX2Q9NPC8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.99■□□□□ 0.79
SIX2Q9NPC8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIX2Q9NPC8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIX2Q9NPC8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX2Q9NPC8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIX2Q9NPC8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SIX2Q9NPC8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.99■□□□□ 0.79
SIX2Q9NPC8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 AP000593.1-201ENST00000393668 712 ntBASIC19.98■□□□□ 0.79
SIX2Q9NPC8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 CR769767.2-201ENST00000622735 460 ntBASIC19.98■□□□□ 0.79
SIX2Q9NPC8 KRT8P9-201ENST00000558927 1449 ntBASIC19.98■□□□□ 0.79
SIX2Q9NPC8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX2Q9NPC8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 INGX-201ENST00000359239 846 ntBASIC19.97■□□□□ 0.79
SIX2Q9NPC8 AC007663.1-201ENST00000438948 1240 ntBASIC19.97■□□□□ 0.79
SIX2Q9NPC8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 AP006294.2-201ENST00000641667 209 ntBASIC19.97■□□□□ 0.79
SIX2Q9NPC8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 AL133373.2-201ENST00000623187 2828 ntBASIC19.97■□□□□ 0.79
SIX2Q9NPC8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX2Q9NPC8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 AC018470.1-201ENST00000624790 3129 ntBASIC19.96■□□□□ 0.79
SIX2Q9NPC8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 TSPY17P-201ENST00000450329 467 ntBASIC19.96■□□□□ 0.79
SIX2Q9NPC8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 MIR4497-201ENST00000583208 89 ntBASIC19.96■□□□□ 0.79
SIX2Q9NPC8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 NOC2LP2-201ENST00000407594 1944 ntBASIC19.96■□□□□ 0.79
SIX2Q9NPC8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX2Q9NPC8 AC099343.3-201ENST00000605834 2503 ntBASIC19.96■□□□□ 0.79
SIX2Q9NPC8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 CYP2D8P-201ENST00000433633 1490 ntBASIC19.95■□□□□ 0.78
SIX2Q9NPC8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms