Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 KRT8P32-201ENST00000512863 1461 ntBASIC16.29■□□□□ 0.2
CDH20Q9HBT6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 GPAT2P1-201ENST00000444924 1672 ntBASIC16.28■□□□□ 0.2
CDH20Q9HBT6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 INGX-201ENST00000359239 846 ntBASIC16.28■□□□□ 0.2
CDH20Q9HBT6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH20Q9HBT6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 ATP5G1P1-201ENST00000448724 379 ntBASIC16.27■□□□□ 0.2
CDH20Q9HBT6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 AC005363.2-201ENST00000618631 242 ntBASIC16.27■□□□□ 0.2
CDH20Q9HBT6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH20Q9HBT6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH20Q9HBT6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms