Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.26■□□□□ 0.35
UBQLN3Q9H347 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBQLN3Q9H347 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 KRT18P57-201ENST00000443599 1254 ntBASIC17.25■□□□□ 0.35
UBQLN3Q9H347 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.25■□□□□ 0.35
UBQLN3Q9H347 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.24■□□□□ 0.35
UBQLN3Q9H347 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 AP003041.3-201ENST00000527151 707 ntBASIC17.24■□□□□ 0.35
UBQLN3Q9H347 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 AL390961.4-201ENST00000623958 2535 ntBASIC17.24■□□□□ 0.35
UBQLN3Q9H347 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.24■□□□□ 0.35
UBQLN3Q9H347 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 LIN28AP1-201ENST00000429574 405 ntBASIC17.23■□□□□ 0.35
UBQLN3Q9H347 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 AL138966.2-201ENST00000621997 464 ntBASIC17.23■□□□□ 0.35
UBQLN3Q9H347 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.23■□□□□ 0.35
UBQLN3Q9H347 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.22■□□□□ 0.35
UBQLN3Q9H347 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms