Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 FGFR3P6-201ENST00000457012 610 ntBASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 AC005829.1-201ENST00000570002 483 ntBASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 MIR4745-201ENST00000577608 62 ntBASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 MIR3917-201ENST00000580971 93 ntBASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 AP001269.4-201ENST00000609611 512 ntBASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CNTNAP3Q9BZ76 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 LINC01006-201ENST00000333319 2292 ntBASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 AC015922.1-201ENST00000421102 1152 ntBASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 CNN2P11-201ENST00000429351 262 ntBASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 GUSBP12-201ENST00000513727 720 ntBASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3Q9BZ76 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 MIR4469-201ENST00000583919 79 ntBASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3Q9BZ76 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms