Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.33■□□□□ 0.68
CDCA3Q99618 FAM215A-202ENST00000632077 792 ntBASIC19.33■□□□□ 0.68
CDCA3Q99618 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDCA3Q99618 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA3Q99618 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.33■□□□□ 0.68
CDCA3Q99618 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CDCA3Q99618 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA3Q99618 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA3Q99618 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA3Q99618 AC007375.3-201ENST00000600936 2314 ntBASIC19.33■□□□□ 0.68
CDCA3Q99618 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDCA3Q99618 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDCA3Q99618 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.32■□□□□ 0.68
CDCA3Q99618 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.32■□□□□ 0.68
CDCA3Q99618 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.32■□□□□ 0.68
CDCA3Q99618 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.32■□□□□ 0.68
CDCA3Q99618 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDCA3Q99618 FGFR3P6-201ENST00000457012 610 ntBASIC19.32■□□□□ 0.68
CDCA3Q99618 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.32■□□□□ 0.68
CDCA3Q99618 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.32■□□□□ 0.68
CDCA3Q99618 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.32■□□□□ 0.68
CDCA3Q99618 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA3Q99618 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.32■□□□□ 0.68
CDCA3Q99618 AL163051.1-201ENST00000569214 1512 ntBASIC19.31■□□□□ 0.68
CDCA3Q99618 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.31■□□□□ 0.68
CDCA3Q99618 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 RCN1P2-201ENST00000398357 915 ntBASIC19.31■□□□□ 0.68
CDCA3Q99618 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.31■□□□□ 0.68
CDCA3Q99618 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDCA3Q99618 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.31■□□□□ 0.68
CDCA3Q99618 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDCA3Q99618 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.31■□□□□ 0.68
CDCA3Q99618 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA3Q99618 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDCA3Q99618 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDCA3Q99618 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.31■□□□□ 0.68
CDCA3Q99618 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.31■□□□□ 0.68
CDCA3Q99618 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDCA3Q99618 TP73-AS1-210ENST00000637775 1455 ntBASIC19.3■□□□□ 0.68
CDCA3Q99618 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCA3Q99618 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCA3Q99618 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA3Q99618 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA3Q99618 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.3■□□□□ 0.68
CDCA3Q99618 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.3■□□□□ 0.68
CDCA3Q99618 AC009533.2-201ENST00000543664 586 ntBASIC19.3■□□□□ 0.68
CDCA3Q99618 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCA3Q99618 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.3■□□□□ 0.68
CDCA3Q99618 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA3Q99618 AC112777.1-201ENST00000540175 1423 ntBASIC19.3■□□□□ 0.68
CDCA3Q99618 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA3Q99618 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA3Q99618 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA3Q99618 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCA3Q99618 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCA3Q99618 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA3Q99618 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDCA3Q99618 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.29■□□□□ 0.68
CDCA3Q99618 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDCA3Q99618 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.29■□□□□ 0.68
CDCA3Q99618 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.29■□□□□ 0.68
CDCA3Q99618 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms