Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
IFT140Q96RY7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC30.76■■■□□ 2.52
IFT140Q96RY7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC30.76■■■□□ 2.52
IFT140Q96RY7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
IFT140Q96RY7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
IFT140Q96RY7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
IFT140Q96RY7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC30.76■■■□□ 2.51
IFT140Q96RY7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
IFT140Q96RY7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
IFT140Q96RY7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
IFT140Q96RY7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
IFT140Q96RY7 MCCD1P2-201ENST00000423228 335 ntBASIC30.76■■■□□ 2.51
IFT140Q96RY7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC30.76■■■□□ 2.51
IFT140Q96RY7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC30.76■■■□□ 2.51
IFT140Q96RY7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC30.76■■■□□ 2.51
IFT140Q96RY7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC30.76■■■□□ 2.51
IFT140Q96RY7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
IFT140Q96RY7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
IFT140Q96RY7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
IFT140Q96RY7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
IFT140Q96RY7 LINC01521-201ENST00000504184 1943 ntBASIC30.75■■■□□ 2.51
IFT140Q96RY7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
IFT140Q96RY7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 INIP-202ENST00000374236 874 ntTSL 2 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
IFT140Q96RY7 PON3-203ENST00000427422 894 ntTSL 3 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 AL596442.2-201ENST00000610240 980 ntBASIC30.75■■■□□ 2.51
IFT140Q96RY7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
IFT140Q96RY7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
IFT140Q96RY7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC30.74■■■□□ 2.51
IFT140Q96RY7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
IFT140Q96RY7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
IFT140Q96RY7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
IFT140Q96RY7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC30.74■■■□□ 2.51
IFT140Q96RY7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC30.74■■■□□ 2.51
IFT140Q96RY7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
IFT140Q96RY7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC30.74■■■□□ 2.51
IFT140Q96RY7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
IFT140Q96RY7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC30.73■■■□□ 2.51
IFT140Q96RY7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
IFT140Q96RY7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
IFT140Q96RY7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC30.73■■■□□ 2.51
IFT140Q96RY7 LAGE3P1-201ENST00000425356 484 ntBASIC30.73■■■□□ 2.51
IFT140Q96RY7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC30.73■■■□□ 2.51
IFT140Q96RY7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
IFT140Q96RY7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC30.73■■■□□ 2.51
IFT140Q96RY7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC30.73■■■□□ 2.51
IFT140Q96RY7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC30.73■■■□□ 2.51
IFT140Q96RY7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC30.73■■■□□ 2.51
IFT140Q96RY7 AC068587.9-201ENST00000641814 219 ntBASIC30.73■■■□□ 2.51
IFT140Q96RY7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
IFT140Q96RY7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
IFT140Q96RY7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
IFT140Q96RY7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC30.73■■■□□ 2.51
IFT140Q96RY7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC30.72■■■□□ 2.51
IFT140Q96RY7 AC254562.1-201ENST00000417586 456 ntBASIC30.72■■■□□ 2.51
IFT140Q96RY7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC30.72■■■□□ 2.51
IFT140Q96RY7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC30.72■■■□□ 2.51
IFT140Q96RY7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
IFT140Q96RY7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC30.72■■■□□ 2.51
IFT140Q96RY7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
IFT140Q96RY7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
IFT140Q96RY7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
IFT140Q96RY7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
IFT140Q96RY7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
IFT140Q96RY7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
IFT140Q96RY7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
IFT140Q96RY7 AC064836.3-201ENST00000607928 673 ntBASIC30.71■■■□□ 2.51
IFT140Q96RY7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC30.71■■■□□ 2.51
IFT140Q96RY7 Z82202.1-201ENST00000623446 1880 ntBASIC30.71■■■□□ 2.51
IFT140Q96RY7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
IFT140Q96RY7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
IFT140Q96RY7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
IFT140Q96RY7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
IFT140Q96RY7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC30.71■■■□□ 2.51
IFT140Q96RY7 AC125634.1-201ENST00000438758 1403 ntBASIC30.7■■■□□ 2.51
IFT140Q96RY7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
IFT140Q96RY7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
IFT140Q96RY7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
IFT140Q96RY7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms