Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 AC125437.2-201ENST00000625180 2167 ntBASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 YBX1P5-201ENST00000509441 847 ntBASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 AC092364.2-202ENST00000597012 1073 ntBASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 KRT18P23-201ENST00000435622 1283 ntBASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 AC009533.2-201ENST00000543664 586 ntBASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.82■□□□□ 0.12
CSMD1Q96PZ7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 AC096582.2-201ENST00000510860 516 ntBASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD1Q96PZ7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 AC099778.1-201ENST00000568593 1911 ntBASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 AC005336.2-201ENST00000593183 939 ntBASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD1Q96PZ7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD1Q96PZ7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms