Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 AL022342.1-201ENST00000400363 863 ntBASIC19.75■□□□□ 0.75
ZNF558Q96NG5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 AC106795.1-205ENST00000512851 1056 ntBASIC19.75■□□□□ 0.75
ZNF558Q96NG5 AL662844.1-201ENST00000546340 181 ntBASIC19.75■□□□□ 0.75
ZNF558Q96NG5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 KRT8P50-201ENST00000562022 1438 ntBASIC19.75■□□□□ 0.75
ZNF558Q96NG5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
ZNF558Q96NG5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 SLC25A6P4-201ENST00000586535 553 ntBASIC19.74■□□□□ 0.75
ZNF558Q96NG5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 AL357033.4-201ENST00000617703 1807 ntBASIC19.74■□□□□ 0.75
ZNF558Q96NG5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF558Q96NG5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 HEIH-201ENST00000623091 1652 ntBASIC19.73■□□□□ 0.75
ZNF558Q96NG5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 NUS1P2-201ENST00000417358 873 ntBASIC19.73■□□□□ 0.75
ZNF558Q96NG5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 AC011840.4-201ENST00000578471 627 ntBASIC19.73■□□□□ 0.75
ZNF558Q96NG5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF558Q96NG5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 MINOS1P3-201ENST00000457048 203 ntBASIC19.72■□□□□ 0.75
ZNF558Q96NG5 AC079776.4-201ENST00000511039 504 ntBASIC19.72■□□□□ 0.75
ZNF558Q96NG5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 AP005901.3-202ENST00000581653 237 ntBASIC19.72■□□□□ 0.75
ZNF558Q96NG5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms