Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM43Q96BQ3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM43Q96BQ3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 YBX2P1-201ENST00000394192 760 ntBASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 AC021087.4-201ENST00000563761 564 ntBASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM43Q96BQ3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
TRIM43Q96BQ3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
TRIM43Q96BQ3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 RPS2P1-201ENST00000434010 821 ntBASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 AC092667.1-201ENST00000434301 2586 ntBASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 LINC01521-201ENST00000504184 1943 ntBASIC20.14■□□□□ 0.81
TRIM43Q96BQ3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 AL591424.1-201ENST00000442569 1213 ntBASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 SART3-203ENST00000546611 1184 ntBASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 AC012640.2-201ENST00000561606 901 ntBASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.13■□□□□ 0.81
TRIM43Q96BQ3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms