Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CHD6Q8TD26 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.7■□□□□ 0.26
CHD6Q8TD26 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHD6Q8TD26 C9orf163-202ENST00000624034 2573 ntBASIC16.7■□□□□ 0.26
CHD6Q8TD26 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.7■□□□□ 0.26
CHD6Q8TD26 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.7■□□□□ 0.26
CHD6Q8TD26 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.7■□□□□ 0.26
CHD6Q8TD26 SPTSSB-204ENST00000617024 1292 ntBASIC16.7■□□□□ 0.26
CHD6Q8TD26 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CHD6Q8TD26 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHD6Q8TD26 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.7■□□□□ 0.26
CHD6Q8TD26 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHD6Q8TD26 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.7■□□□□ 0.26
CHD6Q8TD26 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 AC004461.1-201ENST00000412461 403 ntBASIC16.69■□□□□ 0.26
CHD6Q8TD26 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.69■□□□□ 0.26
CHD6Q8TD26 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 AC104390.1-201ENST00000555663 520 ntBASIC16.69■□□□□ 0.26
CHD6Q8TD26 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 AL138831.2-201ENST00000606564 490 ntBASIC16.69■□□□□ 0.26
CHD6Q8TD26 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 KRT89P-201ENST00000620027 1478 ntBASIC16.69■□□□□ 0.26
CHD6Q8TD26 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD6Q8TD26 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD6Q8TD26 AC136632.2-201ENST00000512891 861 ntBASIC16.69■□□□□ 0.26
CHD6Q8TD26 AL662799.1-202ENST00000614205 422 ntBASIC16.69■□□□□ 0.26
CHD6Q8TD26 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 AL133338.1-201ENST00000565695 1517 ntBASIC16.68■□□□□ 0.26
CHD6Q8TD26 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 FEM1AP1-201ENST00000431297 1995 ntBASIC16.68■□□□□ 0.26
CHD6Q8TD26 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 AC073621.1-201ENST00000392730 636 ntBASIC16.68■□□□□ 0.26
CHD6Q8TD26 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.68■□□□□ 0.26
CHD6Q8TD26 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD6Q8TD26 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD6Q8TD26 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD6Q8TD26 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD6Q8TD26 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD6Q8TD26 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD6Q8TD26 VN2R19P-201ENST00000442399 1052 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms