Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 KRT8P41-201ENST00000533985 1514 ntBASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 ATP5G1P1-201ENST00000448724 379 ntBASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 KRT18P21-201ENST00000515767 1272 ntBASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 AC010947.1-201ENST00000623454 693 ntBASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP1BQ7LBR1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 TSPY14P-201ENST00000303979 915 ntBASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 SLC25A1P2-201ENST00000430693 912 ntBASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CHMP1BQ7LBR1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 AL137013.1-201ENST00000432946 1228 ntBASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 TSPY21P-201ENST00000433481 731 ntBASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 CKBP1-201ENST00000565489 1086 ntBASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP1BQ7LBR1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms