Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 AC005332.3-201ENST00000589904 676 ntBASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 AC068587.9-201ENST00000641814 219 ntBASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC149Q6ZUS6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC149Q6ZUS6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 AL662844.1-201ENST00000546340 181 ntBASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC149Q6ZUS6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC149Q6ZUS6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC149Q6ZUS6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CCDC149Q6ZUS6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC149Q6ZUS6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC149Q6ZUS6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC149Q6ZUS6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.52■□□□□ 0.71
CCDC149Q6ZUS6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC149Q6ZUS6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 AC106795.1-205ENST00000512851 1056 ntBASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 AP002469.2-201ENST00000531724 424 ntBASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 AC138894.3-201ENST00000603787 634 ntBASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 AL390719.2-201ENST00000606993 987 ntBASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 AC006538.3-201ENST00000612495 578 ntBASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 AC004263.2-201ENST00000617183 678 ntBASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC149Q6ZUS6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms