Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 RNF152P1-201ENST00000397754 604 ntBASIC15.26■□□□□ 0.03
TREML4Q6UXN2 AC117947.1-201ENST00000427448 529 ntBASIC15.26■□□□□ 0.03
TREML4Q6UXN2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 AC018470.1-201ENST00000624790 3129 ntBASIC15.26■□□□□ 0.03
TREML4Q6UXN2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.26■□□□□ 0.03
TREML4Q6UXN2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 TFP1-202ENST00000475455 1573 ntBASIC15.25■□□□□ 0.03
TREML4Q6UXN2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 MTATP6P19-201ENST00000413797 659 ntBASIC15.25■□□□□ 0.03
TREML4Q6UXN2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 FAM207BP-201ENST00000447172 505 ntBASIC15.25■□□□□ 0.03
TREML4Q6UXN2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 AC244517.3-201ENST00000616254 1235 ntBASIC15.25■□□□□ 0.03
TREML4Q6UXN2 AC093458.2-201ENST00000623150 629 ntBASIC15.25■□□□□ 0.03
TREML4Q6UXN2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TREML4Q6UXN2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 DGCR10-201ENST00000609839 495 ntBASIC15.24■□□□□ 0.03
TREML4Q6UXN2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 AL691432.3-201ENST00000621860 400 ntBASIC15.24■□□□□ 0.03
TREML4Q6UXN2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 AL512353.2-201ENST00000448759 1962 ntBASIC15.24■□□□□ 0.03
TREML4Q6UXN2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 BICD1-207ENST00000551848 1962 ntBASIC15.24■□□□□ 0.03
TREML4Q6UXN2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.24■□□□□ 0.03
TREML4Q6UXN2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms