Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP13A4Q4VNC1 KRT8P45-201ENST00000414328 1447 ntBASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 AC079598.2-202ENST00000546624 1451 ntBASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 RBM17P1-201ENST00000453646 1190 ntBASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 MIR4674-201ENST00000582457 87 ntBASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP13A4Q4VNC1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 AL390955.1-201ENST00000428694 934 ntBASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP13A4Q4VNC1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 TSPY15P-201ENST00000457163 923 ntBASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 AC112777.1-201ENST00000540175 1423 ntBASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP13A4Q4VNC1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.39■□□□□ 0.7
ATP13A4Q4VNC1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP13A4Q4VNC1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 AC135776.1-201ENST00000319817 2481 ntBASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 MIR564-202ENST00000385049 94 ntBASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 SNORA78-201ENST00000459373 127 ntBASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 AP000525.1-201ENST00000608286 694 ntBASIC19.39■□□□□ 0.69
ATP13A4Q4VNC1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms