Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN20P56880 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN20P56880 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.07■□□□□ 0.32
CLDN20P56880 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN20P56880 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN20P56880 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN20P56880 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN20P56880 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.07■□□□□ 0.32
CLDN20P56880 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN20P56880 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLDN20P56880 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN20P56880 SLC25A3P1-201ENST00000443844 931 ntBASIC17.06■□□□□ 0.32
CLDN20P56880 TSPY17P-201ENST00000450329 467 ntBASIC17.06■□□□□ 0.32
CLDN20P56880 KRT18P21-201ENST00000515767 1272 ntBASIC17.06■□□□□ 0.32
CLDN20P56880 AL353719.1-201ENST00000566847 864 ntBASIC17.06■□□□□ 0.32
CLDN20P56880 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLDN20P56880 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLDN20P56880 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN20P56880 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLDN20P56880 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CLDN20P56880 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLDN20P56880 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLDN20P56880 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN20P56880 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN20P56880 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN20P56880 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CLDN20P56880 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLDN20P56880 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN20P56880 RCN1P1-201ENST00000400413 996 ntBASIC17.05■□□□□ 0.32
CLDN20P56880 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN20P56880 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN20P56880 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLDN20P56880 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN20P56880 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN20P56880 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN20P56880 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN20P56880 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CLDN20P56880 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.05■□□□□ 0.32
CLDN20P56880 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN20P56880 FEM1AP3-201ENST00000403722 1741 ntBASIC17.04■□□□□ 0.32
CLDN20P56880 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLDN20P56880 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN20P56880 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 AC005521.1-201ENST00000393351 872 ntBASIC17.04■□□□□ 0.32
CLDN20P56880 AC113347.1-201ENST00000413321 391 ntBASIC17.04■□□□□ 0.32
CLDN20P56880 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDN20P56880 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN20P56880 AP003041.3-201ENST00000527151 707 ntBASIC17.04■□□□□ 0.32
CLDN20P56880 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN20P56880 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CLDN20P56880 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN20P56880 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLDN20P56880 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN20P56880 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN20P56880 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN20P56880 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN20P56880 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN20P56880 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN20P56880 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN20P56880 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN20P56880 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN20P56880 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms