Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN6P56747 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN6P56747 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN6P56747 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CLDN6P56747 IGHV3-47-201ENST00000425060 335 ntBASIC17.86■□□□□ 0.45
CLDN6P56747 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.86■□□□□ 0.45
CLDN6P56747 AF238378.1-201ENST00000526806 358 ntBASIC17.86■□□□□ 0.45
CLDN6P56747 AL592071.1-201ENST00000611956 408 ntBASIC17.86■□□□□ 0.45
CLDN6P56747 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.86■□□□□ 0.45
CLDN6P56747 AC124864.1-201ENST00000623408 392 ntBASIC17.86■□□□□ 0.45
CLDN6P56747 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN6P56747 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN6P56747 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN6P56747 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLDN6P56747 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN6P56747 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN6P56747 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CLDN6P56747 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN6P56747 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CLDN6P56747 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLDN6P56747 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN6P56747 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.85■□□□□ 0.45
CLDN6P56747 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN6P56747 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 AC090616.6-201ENST00000582640 721 ntBASIC17.85■□□□□ 0.45
CLDN6P56747 BX640515.1-201ENST00000617215 977 ntBASIC17.85■□□□□ 0.45
CLDN6P56747 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLDN6P56747 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN6P56747 PCDHAC2-203ENST00000615316 3011 ntBASIC17.85■□□□□ 0.45
CLDN6P56747 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN6P56747 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN6P56747 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN6P56747 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN6P56747 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN6P56747 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
CLDN6P56747 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN6P56747 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CLDN6P56747 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN6P56747 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN6P56747 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.84■□□□□ 0.45
CLDN6P56747 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN6P56747 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN6P56747 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN6P56747 AC104390.1-201ENST00000555663 520 ntBASIC17.84■□□□□ 0.45
CLDN6P56747 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN6P56747 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.84■□□□□ 0.45
CLDN6P56747 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 AL512353.2-201ENST00000448759 1962 ntBASIC17.84■□□□□ 0.45
CLDN6P56747 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN6P56747 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN6P56747 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN6P56747 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN6P56747 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN6P56747 NSUN5P1-202ENST00000421140 1535 ntBASIC17.83■□□□□ 0.45
CLDN6P56747 NSUN5P2-203ENST00000457352 1529 ntBASIC17.83■□□□□ 0.45
CLDN6P56747 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.83■□□□□ 0.45
CLDN6P56747 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CLDN6P56747 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CLDN6P56747 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN6P56747 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms