Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.22■□□□□ 0.35
PER3P56645 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.21■□□□□ 0.35
PER3P56645 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.21■□□□□ 0.35
PER3P56645 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.21■□□□□ 0.35
PER3P56645 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.21■□□□□ 0.35
PER3P56645 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PER3P56645 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.21■□□□□ 0.35
PER3P56645 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PER3P56645 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.21■□□□□ 0.35
PER3P56645 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PER3P56645 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.34
PER3P56645 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.2■□□□□ 0.34
PER3P56645 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.2■□□□□ 0.34
PER3P56645 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.2■□□□□ 0.34
PER3P56645 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.2■□□□□ 0.34
PER3P56645 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PER3P56645 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PER3P56645 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PER3P56645 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PER3P56645 TCF3P1-201ENST00000423021 1937 ntBASIC17.2■□□□□ 0.34
PER3P56645 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.2■□□□□ 0.34
PER3P56645 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PER3P56645 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PER3P56645 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PER3P56645 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.2■□□□□ 0.34
PER3P56645 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.2■□□□□ 0.34
PER3P56645 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PER3P56645 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.2■□□□□ 0.34
PER3P56645 PRSS44-201ENST00000515154 1146 ntBASIC17.2■□□□□ 0.34
PER3P56645 AL441883.1-201ENST00000566170 1045 ntBASIC17.2■□□□□ 0.34
PER3P56645 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.2■□□□□ 0.34
PER3P56645 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.2■□□□□ 0.34
PER3P56645 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PER3P56645 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PER3P56645 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PER3P56645 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PER3P56645 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PER3P56645 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PER3P56645 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.2■□□□□ 0.34
PER3P56645 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PER3P56645 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PER3P56645 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.19■□□□□ 0.34
PER3P56645 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.19■□□□□ 0.34
PER3P56645 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.19■□□□□ 0.34
PER3P56645 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PER3P56645 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PER3P56645 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.19■□□□□ 0.34
PER3P56645 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.19■□□□□ 0.34
PER3P56645 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.19■□□□□ 0.34
PER3P56645 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.19■□□□□ 0.34
PER3P56645 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.19■□□□□ 0.34
PER3P56645 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
PER3P56645 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.19■□□□□ 0.34
PER3P56645 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PER3P56645 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PER3P56645 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.19■□□□□ 0.34
PER3P56645 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PER3P56645 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PER3P56645 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PER3P56645 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PER3P56645 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
PER3P56645 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PER3P56645 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.18■□□□□ 0.34
PER3P56645 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms