Protein–RNA interactions for Protein: P55735

SEC13, Protein SEC13 homolog, humanhuman

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P55735 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SEC13P55735 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.81■□□□□ 0.6
SEC13P55735 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.81■□□□□ 0.6
SEC13P55735 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.81■□□□□ 0.6
SEC13P55735 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SEC13P55735 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.81■□□□□ 0.6
SEC13P55735 AC009078.2-202ENST00000463353 338 ntBASIC18.81■□□□□ 0.6
SEC13P55735 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.81■□□□□ 0.6
SEC13P55735 AC090616.6-201ENST00000582640 721 ntBASIC18.81■□□□□ 0.6
SEC13P55735 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.81■□□□□ 0.6
SEC13P55735 GPR32P1-201ENST00000601788 811 ntBASIC18.81■□□□□ 0.6
SEC13P55735 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.81■□□□□ 0.6
SEC13P55735 AL031008.1-201ENST00000619963 541 ntBASIC18.81■□□□□ 0.6
SEC13P55735 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.81■□□□□ 0.6
SEC13P55735 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.81■□□□□ 0.6
SEC13P55735 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.81■□□□□ 0.6
SEC13P55735 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SEC13P55735 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEC13P55735 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SEC13P55735 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.8■□□□□ 0.6
SEC13P55735 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SEC13P55735 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SEC13P55735 KRT17P6-201ENST00000453795 1220 ntBASIC18.8■□□□□ 0.6
SEC13P55735 KRT18P31-201ENST00000506277 1292 ntBASIC18.8■□□□□ 0.6
SEC13P55735 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.8■□□□□ 0.6
SEC13P55735 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.8■□□□□ 0.6
SEC13P55735 LINC01711-201ENST00000598340 967 ntBASIC18.8■□□□□ 0.6
SEC13P55735 AC099336.1-202ENST00000602961 463 ntBASIC18.8■□□□□ 0.6
SEC13P55735 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
SEC13P55735 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.8■□□□□ 0.6
SEC13P55735 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC13P55735 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC13P55735 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC13P55735 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SEC13P55735 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SEC13P55735 AC079781.3-201ENST00000449110 356 ntBASIC18.79■□□□□ 0.6
SEC13P55735 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.79■□□□□ 0.6
SEC13P55735 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SEC13P55735 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SEC13P55735 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.79■□□□□ 0.6
SEC13P55735 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.79■□□□□ 0.6
SEC13P55735 AC124864.1-201ENST00000623408 392 ntBASIC18.79■□□□□ 0.6
SEC13P55735 AC068587.9-201ENST00000641814 219 ntBASIC18.79■□□□□ 0.6
SEC13P55735 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SEC13P55735 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC13P55735 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC13P55735 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.78■□□□□ 0.6
SEC13P55735 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC13P55735 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC13P55735 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC13P55735 AFG3L1P-217ENST00000557444 2447 ntBASIC18.78■□□□□ 0.6
SEC13P55735 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEC13P55735 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC13P55735 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEC13P55735 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC13P55735 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SEC13P55735 AP000347.1-202ENST00000435868 847 ntBASIC18.78■□□□□ 0.6
SEC13P55735 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.78■□□□□ 0.6
SEC13P55735 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.78■□□□□ 0.6
SEC13P55735 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms