Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.64■□□□□ 0.41
NR1H2P55055 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NR1H2P55055 POM121L13P-201ENST00000422362 380 ntBASIC17.64■□□□□ 0.41
NR1H2P55055 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.64■□□□□ 0.41
NR1H2P55055 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.64■□□□□ 0.41
NR1H2P55055 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.64■□□□□ 0.41
NR1H2P55055 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.64■□□□□ 0.41
NR1H2P55055 C1QBPP2-201ENST00000528754 825 ntBASIC17.64■□□□□ 0.41
NR1H2P55055 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.64■□□□□ 0.41
NR1H2P55055 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NR1H2P55055 AL356652.1-201ENST00000615962 565 ntBASIC17.64■□□□□ 0.41
NR1H2P55055 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.64■□□□□ 0.41
NR1H2P55055 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NR1H2P55055 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NR1H2P55055 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NR1H2P55055 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 ANO7L1-203ENST00000602586 1720 ntBASIC17.64■□□□□ 0.41
NR1H2P55055 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H2P55055 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NR1H2P55055 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NR1H2P55055 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.63■□□□□ 0.41
NR1H2P55055 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.63■□□□□ 0.41
NR1H2P55055 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.63■□□□□ 0.41
NR1H2P55055 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NR1H2P55055 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.63■□□□□ 0.41
NR1H2P55055 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.63■□□□□ 0.41
NR1H2P55055 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.63■□□□□ 0.41
NR1H2P55055 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.63■□□□□ 0.41
NR1H2P55055 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.63■□□□□ 0.41
NR1H2P55055 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.63■□□□□ 0.41
NR1H2P55055 AC069544.1-201ENST00000609399 999 ntBASIC17.63■□□□□ 0.41
NR1H2P55055 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.63■□□□□ 0.41
NR1H2P55055 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.63■□□□□ 0.41
NR1H2P55055 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
NR1H2P55055 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.63■□□□□ 0.41
NR1H2P55055 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.63■□□□□ 0.41
NR1H2P55055 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.63■□□□□ 0.41
NR1H2P55055 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NR1H2P55055 IRX1P1-201ENST00000438849 1838 ntBASIC17.63■□□□□ 0.41
NR1H2P55055 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NR1H2P55055 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NR1H2P55055 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NR1H2P55055 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.62■□□□□ 0.41
NR1H2P55055 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NR1H2P55055 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.62■□□□□ 0.41
NR1H2P55055 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NR1H2P55055 AL390719.1-204ENST00000412397 1219 ntBASIC17.62■□□□□ 0.41
NR1H2P55055 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.62■□□□□ 0.41
NR1H2P55055 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
NR1H2P55055 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 AC008550.1-201ENST00000511500 884 ntBASIC17.62■□□□□ 0.41
NR1H2P55055 RPPH1-201ENST00000516869 333 ntBASIC17.62■□□□□ 0.41
NR1H2P55055 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.62■□□□□ 0.41
NR1H2P55055 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.62■□□□□ 0.41
NR1H2P55055 RN7SL471P-201ENST00000580476 299 ntBASIC17.62■□□□□ 0.41
NR1H2P55055 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.62■□□□□ 0.41
NR1H2P55055 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.62■□□□□ 0.41
NR1H2P55055 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NR1H2P55055 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NR1H2P55055 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms