Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC096582.2-201ENST00000510860 516 ntBASIC20.48■□□□□ 0.87
ACLYP53396 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ACLYP53396 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ACLYP53396 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.48■□□□□ 0.87
ACLYP53396 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACLYP53396 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.48■□□□□ 0.87
ACLYP53396 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.48■□□□□ 0.87
ACLYP53396 FP475955.4-201ENST00000623131 1990 ntBASIC20.48■□□□□ 0.87
ACLYP53396 AL157384.1-201ENST00000445995 2473 ntBASIC20.48■□□□□ 0.87
ACLYP53396 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.48■□□□□ 0.87
ACLYP53396 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ACLYP53396 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.48■□□□□ 0.87
ACLYP53396 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.48■□□□□ 0.87
ACLYP53396 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.47■□□□□ 0.87
ACLYP53396 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.47■□□□□ 0.87
ACLYP53396 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 Z98044.1-201ENST00000632503 1764 ntBASIC20.47■□□□□ 0.87
ACLYP53396 KRT8P50-201ENST00000562022 1438 ntBASIC20.47■□□□□ 0.87
ACLYP53396 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ACLYP53396 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 AC132008.2-207ENST00000454517 770 ntBASIC20.47■□□□□ 0.87
ACLYP53396 RNPS1P1-201ENST00000507437 918 ntBASIC20.47■□□□□ 0.87
ACLYP53396 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.47■□□□□ 0.87
ACLYP53396 AC106730.1-201ENST00000566722 1090 ntBASIC20.47■□□□□ 0.87
ACLYP53396 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.47■□□□□ 0.87
ACLYP53396 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 AC008608.2-201ENST00000606089 416 ntBASIC20.47■□□□□ 0.87
ACLYP53396 AC114341.1-201ENST00000618070 349 ntBASIC20.47■□□□□ 0.87
ACLYP53396 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.47■□□□□ 0.87
ACLYP53396 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ACLYP53396 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ACLYP53396 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ACLYP53396 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ACLYP53396 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ACLYP53396 AC243591.1-201ENST00000452967 1364 ntBASIC20.46■□□□□ 0.87
ACLYP53396 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.46■□□□□ 0.87
ACLYP53396 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ACLYP53396 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACLYP53396 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACLYP53396 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACLYP53396 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACLYP53396 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.46■□□□□ 0.87
ACLYP53396 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.46■□□□□ 0.87
ACLYP53396 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ACLYP53396 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.46■□□□□ 0.87
ACLYP53396 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACLYP53396 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ACLYP53396 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACLYP53396 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ACLYP53396 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.45■□□□□ 0.86
ACLYP53396 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.45■□□□□ 0.86
ACLYP53396 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.45■□□□□ 0.86
ACLYP53396 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
ACLYP53396 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.45■□□□□ 0.86
ACLYP53396 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
ACLYP53396 POLD2P1-201ENST00000511220 997 ntBASIC20.45■□□□□ 0.86
ACLYP53396 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.45■□□□□ 0.86
ACLYP53396 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.45■□□□□ 0.86
ACLYP53396 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 AC092865.5-201ENST00000545435 363 ntBASIC20.45■□□□□ 0.86
ACLYP53396 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ACLYP53396 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.45■□□□□ 0.86
ACLYP53396 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
ACLYP53396 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.45■□□□□ 0.86
ACLYP53396 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ACLYP53396 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.44■□□□□ 0.86
ACLYP53396 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACLYP53396 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACLYP53396 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ACLYP53396 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACLYP53396 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ACLYP53396 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACLYP53396 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ACLYP53396 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ACLYP53396 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.44■□□□□ 0.86
ACLYP53396 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.44■□□□□ 0.86
ACLYP53396 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.44■□□□□ 0.86
ACLYP53396 AC018712.1-201ENST00000455767 687 ntBASIC20.44■□□□□ 0.86
ACLYP53396 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.44■□□□□ 0.86
ACLYP53396 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms